Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00775 ATGCTAGGTAACCCGGACGGAGGAAGAGGAAGTGGTGGTGGTGGTGGTGGTGGTGGAAGAGAAAGAGAAACAGCTACGAGGAAGAGAGCTCTAGAAGGTGAAAGAAGGTACAAAGGGATAAGGATGAGGAAGTGGGGTAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGTTCTAGGATTTGGCTTGGTTCTTATTCAACGCCGGTCGCCGCCGCTCGGGCTTACGACACTGCAGTATTTTACCTCAGGGGACCATCCGCACGCCTTAATTTCCCGGAGCTATTGACCGGTGAAGCTGGCGGCGTTACCGATGGTGACATGTCGGCGGCTACCATTAGGAAGAAAGCTACAGAGGTAGGAGCTAGAGTCGATGCGCTTCAAACATCTTTGCACAGACATCACCATGCATCGTCGGTGTCCGAAAGTAGCCCTCGCGGCATCGGCGGCGGTGGAGATAGAGAATTCGTGGAACGGGTCGATTTGAATAAGGTACCCGAACCCGAAGATTCGGACTGTGAGTGGGAGATTAATTGA 537 0.5289 MLGNPDGGRGSGGGGGGGGRERETATRKRALEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLTGEAGGVTDGDMSAATIRKKATEVGARVDALQTSLHRHHHASSVSESSPRGIGGGGDREFVERVDLNKVPEPEDSDCEWEIN* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00775 178 FunFam Ethylene-responsive transcription factor 2 35 94 - -
Pte6g00775 178 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Pte6g00775 178 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Pte6g00775 178 CDD AP2 36 95 IPR001471 GO:0003700|GO:0006355
Pte6g00775 178 MobiDBLite consensus disorder prediction 1 32 - -
Pte6g00775 178 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 24 172 - -
Pte6g00775 178 SUPERFAMILY DNA-binding domain 36 94 IPR016177 GO:0003677
Pte6g00775 178 MobiDBLite consensus disorder prediction 131 156 - -
Pte6g00775 178 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Pte6g00775 178 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Pte6g00775 178 PRINTS Ethylene responsive element binding protein signature 75 95 IPR001471 GO:0003700|GO:0006355
Pte6g00775 178 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00775 Pte-Chr6 17446308 17448517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00775 15 176 AP2-EREBP Transcription Factor Family AT5G67190 57.297 1.76e-60 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte6g00775 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00775 K09286 - qsa:O6P43_034519 247.284