Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00773 ATGTGGGATCTTAATGACTCTCCTGATCAGAGAAGACTGGATGATGAATCAGAAGAAGGATGTTCATCTCCTAAGACATCTATCGATGGAGATGATGATAAAGGCAAACGGATTGGATCCGTTTCTAATTCCAGTTCATCTGCTGTGGTGATAGAGGAAGGATCAGAAGAAGAAGAAGAACAAGAAGAAGAAGCTGAACGGAGCAGGACTTTCAGGAAGCGAAGCAGTAAGATATTCGGCTTTTCTATGAACCAGGATCAGTCGTCCGTGGACGGTGGTCAACCAGTGACTCGCCAGTTTTTTCCGGTGGACGAATCTGAGATGGCTATTTCGTCCAGTGGAGGAGAGGTTGGTGGTGGTGCTGACGGTGGCCACAGCTCCTCCTTCCCCCGTGCTCACTGGGTTGGTGTCAAGTTCTGTCAATCGGACTCGCTTGTTATCGGAAAACCATTAGAGCCATCACAGCCTGTGAAGAAGAGTCGCAGAGGGCCAAGGTCACGGAGCTCTCAGTACAGAGGTGTTACCTTTTACAGAAGAACTGGTCGATGGGAGTCTCACATATGGGATTGTGGAAAACAAGTTTATCTGGGAGGATTTGACACAGCACATGCAGCTGCTCGTGCTTATGATCGAGCTGCTATTAAGTTCAGAGGTGTAGACGCTGACATAAACTTCAACATTGAAGATTACGAGGAAGACTTGAAGCAGATGAGCAATCTCACCAAGGAAGAATTTGTCCATGTACTTCGTCGACAAAGCACCGGATTTCCTAGAGGTAGCTCCAAATATAGAGGTGTAACCTTGCATAAATGTGGCAGATGGGAAGCTCGAATGGGCCAATTTCTGGGCAAAAAATACGTTTACTTGGGCTTATTTGATACGGAGATAGAAGCTGCAAGGGCTTATGACAAGGCAGCAATTAAGTGCAATGGTAAAGAGGCTGTTACCAACTTTGATCCAAGTATCTATAGTAATGAACTGAACTTTGAAGCGTCTGGTGAAGCTGCCGAACACAATCTCGATCTGAGTTTGGGTTCTTCAAGCTCCAAGCACTCAAGCTCGGTGATTGATCAGCATTCTAAACCTTTGGCGTCCGAGTCTGATTGGAGGCACAGCACTTCTAGGCCTAATAAGGAGCAAATGTACAGAAGTGACAACCTTGAAGTAAGAGATGGATACAATGAGACTGAAACCCGGCAGCGTCTGAGTCAAACACACCTTCAGTCATCAGCACCTAGTGATTTACACAGATATGGACGGTATATAAGGTCTGGAGAACAACCACAGATGGTTCCCAATTTGCCACCCAGTCATCATCCTCATAGTTATCTTTTCTCGAGCGGCAGCAATGGAGGACGGATTGGAAATGATCACCTTGGACTGTCAATGACAGATCAACAGTGGCAATCCCGACCTCCTCCTCTTGTTTTTGCAACTGCTGCAGCATCATCAGGATTCTCACAGCATGTTCAGAAAAATGGATTCCATTCTCTGATGAGACCCACTTAA 1509 0.4612 MWDLNDSPDQRRLDDESEEGCSSPKTSIDGDDDKGKRIGSVSNSSSSAVVIEEGSEEEEEQEEEAERSRTFRKRSSKIFGFSMNQDQSSVDGGQPVTRQFFPVDESEMAISSSGGEVGGGADGGHSSSFPRAHWVGVKFCQSDSLVIGKPLEPSQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYSNELNFEASGEAAEHNLDLSLGSSSSKHSSSVIDQHSKPLASESDWRHSTSRPNKEQMYRSDNLEVRDGYNETETRQRLSQTHLQSSAPSDLHRYGRYIRSGEQPQMVPNLPPSHHPHSYLFSSGSNGGRIGNDHLGLSMTDQQWQSRPPPLVFATAAASSGFSQHVQKNGFHSLMRPT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00773 502 SUPERFAMILY DNA-binding domain 169 227 IPR016177 GO:0003677
Pte6g00773 502 SUPERFAMILY DNA-binding domain 261 321 IPR016177 GO:0003677
Pte6g00773 502 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 407 - -
Pte6g00773 502 FunFam AP2-like ethylene-responsive transcription factor 169 228 - -
Pte6g00773 502 CDD AP2 170 227 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 MobiDBLite consensus disorder prediction 150 171 - -
Pte6g00773 502 FunFam AP2-like ethylene-responsive transcription factor 261 321 - -
Pte6g00773 502 SMART rav1_2 170 232 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 SMART rav1_2 262 325 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 ProSiteProfiles AP2/ERF domain profile. 262 319 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 MobiDBLite consensus disorder prediction 343 361 - -
Pte6g00773 502 PRINTS Ethylene responsive element binding protein signature 301 321 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 PRINTS Ethylene responsive element binding protein signature 263 274 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 MobiDBLite consensus disorder prediction 1 38 - -
Pte6g00773 502 Gene3D AP2/ERF domain 261 320 IPR036955 GO:0003700|GO:0006355
Pte6g00773 502 Gene3D AP2/ERF domain 169 228 IPR036955 GO:0003700|GO:0006355
Pte6g00773 502 Pfam AP2 domain 170 218 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 Pfam AP2 domain 261 310 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 MobiDBLite consensus disorder prediction 343 451 - -
Pte6g00773 502 ProSiteProfiles AP2/ERF domain profile. 170 226 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 CDD AP2 261 321 IPR001471 GO:0003700|GO:0006355
Pte6g00773 502 MobiDBLite consensus disorder prediction 398 412 - -
Pte6g00773 502 MobiDBLite consensus disorder prediction 1 72 - -
Pte6g00773 502 MobiDBLite consensus disorder prediction 363 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00773 Pte-Chr6 17430957 17433771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00773 1 353 AP2-EREBP Transcription Factor Family AT4G36920 66.304 3.70e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte6g00773 AP2 3.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00773 K09284 - qsa:O6P43_024617 629.017