Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00760 ATGGAGTCCGTATGGTCAACACCAACGGCGGCGGCAGCAGCAGCAGCTTCAACCTTAACACCGCGGATGGCTTTGTTCAGAGCTCTAACTCTTAACAAATCTTCTTCGCCATCTCAAAGTCTTCCAACTCAAATTCTCCATCGCAGACTCAAATCTTTCATTTCTTACAATTATCACATTCATTCTGTTCATGCTTTCCAGTTTACTTCTTCTACATCTTTACGATTTTTGAATGTGGCGGCTCCATTTGTTAAGCTGCGTCGTTTGGAATGCCTTTCGAGCTCTGCTGCTTCATTTGCTTCGGGTGGCGGAGGTGGCGGAACTGTAGGTGGCAGCGGTGGGGGAGGCGAAAGTGGTGGTGAAGCGGGTGATATGAATCCTACGTTGGTTTCTGTGGGTGGTAAAGAAATTTCTGCGATTTCGTCCGATGTAATCATACTTGATGTCAGGGGAATGGTATGTGGGGGTTGTGCTGCTAGTGTGAAAAGGATTCTTGAAAGTCAACCACAAGTATCATCTGCAAGCGTAAATCTTACGACAGAGACAGCTATAGTTTGGCCTGTATCTGAAGCAAAAGTTGCGGCAGATTGGCAAAAGGAGTTGGGAGAGGCACTTGCAAAACATCTGACAAATTGCGGTTTCAATTCTAATCTTCGAGATGCAGGAAAAGACAATTTCCGGAAGGTTTTTGAAAAAAAGATGGAAGAGAAGCACAAACTCTTGAGAGAAAGTGGTCATGAGCTAGCAGTTTCGTGGGCTTTATGCGCCGTCTGCCTTGTTGGGCATCTTTCTCATTTCTTTGGGGCAAAGGCTTCATGGATTCACATGGTCCATTCAACTGGGTTTCATCTATCCTTGTCTTTGTTTACACTGCTTGGACCTGGCCGCCAGCTTATTGTTGATGGTATCAAAAGCCTCATTAGAAGGGCACCAAACATGAATACTCTAGTTGCTCTTGGGGCCTTATCGTCATTCTCTGTCAGTTCAATTGCAACTTTGCTTCCCCACCTAGGCTGGAAGGCCTTCTTTGAGGAACCGATAATGCTAATTGCATTTGTCTTGCTGGGAAGGAATCTTGAGCAGAGAGCCAAAATCAAAGCAACCAGTGACATGACAGGGCTGCTTAGTGTATTACCTCCGAAAGCTCGTCTTCTGGTTAACAATGAAGGAACAAATTTAGGCTCATTGGTTGAAGTTTCTTCTGATAGCCTTTCAGTCGGAGACCATGTCCTTGTTCTACCTGGAGACCGTGTACCAGCGGATGGAATTGTCAAAGCTGGCAGGAGTATTATTGATGAATCCAGTTTTACCGGGGAGCCTCTACCTGTGACAAAACTACCTGGGAGCCAAGTAGCAGCTGGAAGCATAAATCTCAATGGAACTCTTACTATTGAAGTGCGGAGACCTGGGGGTGAGACTGCCATGGGAGACATAATACGACTTGTGGAGGAAGCACAAAATAGAGAAGCCCCTGTGCAGAGATTAGCTGACAAGGTATCTGGACACTTCACGTATGGAGTTATGGCAGTCTCTGCAGCCACATTTACATTTTGGACTCTCTTTGGTACTCGGATACTACCTGCTGCCATACATCAAGGAAATACAGTTTCATTGGCGCTGCAGCTTGCTTGCAGTGTGCTGGTTGTTGCTTGTCCATGTGCACTTGGCTTAGCCACACCTACTGCTGTGTTGGTGGGAACTTCTTTAGGGGCCACAAGAGGATTGCTTTTGCGTGGTGGAAGCATTTTAGAGAAATTTTCAATGGTCAATACCATTGTGTTTGATAAAACAGGGACCTTGACAATCGGCAAACCTGTTGTGAAAAAGGTTATGGGAACAAGAGCTGCAGAAAATGCAGATGCAAGAAATGAAGAACATCCTTGGAGTGAACTTGAGGTTCTTGGATTAGCTGCTGCAGTAGAGTCAAATACAGTTCATCCAGTAGGGAAAGCCATTGTGGATGCTGCACGTGCAAATAATTGTCATATTGGCAATGCAACAGATGGAACATTTTATGAAGAACCTGGTTGTGGTGCTGTGGCAACTGTTGGAAACAAAAGAATTTCTGTTGGGACATTGGAATGGGTTATGAGGCACGGAGTGAACAGTTGTGCATATCGAGAAGTGGGTGAGGAGCAAAATCAATCTGTTGTTTATGTTGGTGTTAATGATGCATTAGCTGGCGTTATTTATATAGAGGACCGTATCAGAGAAGATGCAAGCCTTGTCATTGAATCTCTTACCAAACAAGGAATTGATACATATATGCTATCTGGTGACAAACAGAATACAGCCGAGTACGTCGCATCTCTTGTTGGTATACCAAAAGCGAAGGTCCTTTCAGGAGTGAAACCAGAAGGGAAAAAGAAATATATAGAAAAACTCCAGCAGGATCAGAACATTGTGGGGATGGTTGGTGATGGAATAAATGATGCTGCTGCCTTGGCTTCATCTCATATTGGTATTGCCTTGAGTGGTGGAGTTGGAGCTGCGAGTGAGGTCTCTTCCATTGTTCTAATGGGAAACAGGCTCTCACAGTTACTTGATGCTTTGGAGCTCAGTAGACTAACTATGATGACTGTGAAACAAAACCTATGGTGGGCATTCATTTACAACATTGTTGGAATTCCAATTGCTGCAGGATTATTGTTACCTATAAGTGGAACCATGCTGAGTCCGTCAATTGCAGGGGCACTCATGGGGTTGAGTTCTATTGGGGTGATGACAAACTCTTTACTTCTGAGATATAGATTTGCAGCAAGACAGAAACAGATATATGGTGTGGACAAAGGCACTGGCATTCAGGTGGATTCTAGTTCGGCACATGAGAGATAA 2835 0.4459 MESVWSTPTAAAAAAASTLTPRMALFRALTLNKSSSPSQSLPTQILHRRLKSFISYNYHIHSVHAFQFTSSTSLRFLNVAAPFVKLRRLECLSSSAASFASGGGGGGTVGGSGGGGESGGEAGDMNPTLVSVGGKEISAISSDVIILDVRGMVCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSEAKVAADWQKELGEALAKHLTNCGFNSNLRDAGKDNFRKVFEKKMEEKHKLLRESGHELAVSWALCAVCLVGHLSHFFGAKASWIHMVHSTGFHLSLSLFTLLGPGRQLIVDGIKSLIRRAPNMNTLVALGALSSFSVSSIATLLPHLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSVLPPKARLLVNNEGTNLGSLVEVSSDSLSVGDHVLVLPGDRVPADGIVKAGRSIIDESSFTGEPLPVTKLPGSQVAAGSINLNGTLTIEVRRPGGETAMGDIIRLVEEAQNREAPVQRLADKVSGHFTYGVMAVSAATFTFWTLFGTRILPAAIHQGNTVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGSILEKFSMVNTIVFDKTGTLTIGKPVVKKVMGTRAAENADARNEEHPWSELEVLGLAAAVESNTVHPVGKAIVDAARANNCHIGNATDGTFYEEPGCGAVATVGNKRISVGTLEWVMRHGVNSCAYREVGEEQNQSVVYVGVNDALAGVIYIEDRIREDASLVIESLTKQGIDTYMLSGDKQNTAEYVASLVGIPKAKVLSGVKPEGKKKYIEKLQQDQNIVGMVGDGINDAAALASSHIGIALSGGVGAASEVSSIVLMGNRLSQLLDALELSRLTMMTVKQNLWWAFIYNIVGIPIAAGLLLPISGTMLSPSIAGALMGLSSIGVMTNSLLLRYRFAARQKQIYGVDKGTGIQVDSSSAHER* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00760 944 PANTHER ATP7, ISOFORM B 138 916 - -
Pte6g00760 944 PRINTS Copper-transporting ATPase signature 298 317 - -
Pte6g00760 944 PRINTS Copper-transporting ATPase signature 346 365 - -
Pte6g00760 944 PRINTS Copper-transporting ATPase signature 782 799 - -
Pte6g00760 944 PRINTS Copper-transporting ATPase signature 576 591 - -
Pte6g00760 944 SUPERFAMILY Calcium ATPase, transduction domain A 394 482 IPR008250 -
Pte6g00760 944 SUPERFAMILY HMA, heavy metal-associated domain 145 188 IPR036163 GO:0046872
Pte6g00760 944 ProSitePatterns Heavy-metal-associated domain. 149 178 IPR017969 GO:0046872
Pte6g00760 944 Gene3D - 584 855 IPR023214 -
Pte6g00760 944 ProSitePatterns E1-E2 ATPases phosphorylation site. 595 601 IPR018303 -
Pte6g00760 944 FunFam Copper-transporting ATPase PAA1, chloroplastic 143 218 - -
Pte6g00760 944 Gene3D - 604 736 IPR023299 GO:0000166
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 593 607 - -
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 728 739 - -
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 805 824 - -
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 828 840 - -
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Pte6g00760 944 PRINTS P-type cation-transporting ATPase superfamily signature 750 760 - -
Pte6g00760 944 FunFam Copper-transporting ATPase PAA1 chloroplastic 604 736 - -
Pte6g00760 944 Pfam E1-E2 ATPase 378 571 - -
Pte6g00760 944 NCBIfam HAD-IC family P-type ATPase 350 617 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00760 944 NCBIfam HAD-IC family P-type ATPase 642 884 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00760 944 NCBIfam copper-translocating P-type ATPase 295 915 - -
Pte6g00760 944 Pfam haloacid dehalogenase-like hydrolase 589 817 - -
Pte6g00760 944 Gene3D - 363 486 - -
Pte6g00760 944 ProSiteProfiles Heavy-metal-associated domain profile. 143 210 IPR006121 GO:0046872
Pte6g00760 944 Pfam Heavy-metal-associated domain 147 210 IPR006121 GO:0046872
Pte6g00760 944 CDD HMA 147 202 IPR006121 GO:0046872
Pte6g00760 944 SUPERFAMILY Calcium ATPase, transmembrane domain M 343 879 IPR023298 -
Pte6g00760 944 MobiDBLite consensus disorder prediction 99 120 - -
Pte6g00760 944 Gene3D - 144 221 - -
Pte6g00760 944 SFLD p-type atpase 576 855 IPR044492 -
Pte6g00760 944 NCBIfam heavy metal translocating P-type ATPase 313 914 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pte6g00760 944 SFLD Haloacid Dehalogenase 576 855 - -
Pte6g00760 944 SUPERFAMILY HAD-like 591 911 IPR036412 -
Pte6g00760 944 FunFam Copper-transporting ATPase 1, putative 364 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00760 Pte-Chr6 15490032 15520763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00760 304 915 Primary Pumps ATPases AT1G63440 39.241 5.33e-118 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00760 K17686 - qsu:112032422 1265.37