LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte6g00737	ATGCTGCAGGGCAGTCTACAAGTTCTATTGCTGTATCAATTAAGTAGATGGTCACTTGGTTTTCGACAATCGAAGTTAGATGTAATTAAAGCTGGAATAATGCTCAAGTCCAGCAATAATTATGTGTTCTGTTCTTTGTTGTTTGTTGCCTCCACGGGCGATACTGAAGCTTTGAAATCCATAATTGGTCAAGAAGGATTGAATCTTGACCACCAAGATGATAAAGGTTTTTCTGCAGTCATGCTTACTGCTTTGAAGGGCCATGTCGAAGCATTTCGCGTACTGCTTTATGTTGGGGCTAATGTAAAACTTTACAGCAAGTCTAGTGAAAATGCTTTTACTCTGTCCGCATTCAATGAGAATTGTGATCTTTTTGAGAAGGTGACTCTTGAATTTACACTTGAAAGGGGCAACCATGATACCAGAGGATTCGATACTTTGTATTGTGCTTCTCGTCGTGGTGACTTTGACGCAGTTGAATTGCTCACCAATAAAGGTTATGATGTTAATATAGAAGACGGTGATGGGTATACACCACCCATGTTAGTAGCGCGAGACGGACATGGTGCCATCTGTAAACTGTTGATTTCTAAAGGTGCCCGCTGCAACACAAATATCTCATGCATTGAATTGTGTAGAAAGCGAAGATGA	651	0.4055	MLQGSLQVLLLYQLSRWSLGFRQSKLDVIKAGIMLKSSNNYVFCSLLFVASTGDTEALKSIIGQEGLNLDHQDDKGFSAVMLTALKGHVEAFRVLLYVGANVKLYSKSSENAFTLSAFNENCDLFEKVTLEFTLERGNHDTRGFDTLYCASRRGDFDAVELLTNKGYDVNIEDGDGYTPPMLVARDGHGAICKLLISKGARCNTNISCIELCRKRR*	217

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte6g00737	216	Gene3D	-	23	129	IPR036770	-
	Pte6g00737	216	Gene3D	-	130	215	IPR036770	-
	Pte6g00737	216	PANTHER	ANKYRIN REPEAT-CONTAINING	25	203	-	-
	Pte6g00737	216	ProSiteProfiles	Ankyrin repeat profile.	75	107	IPR002110	GO:0005515
	Pte6g00737	216	ProSiteProfiles	Ankyrin repeat region circular profile.	142	173	-	-
	Pte6g00737	216	SUPERFAMILY	Ankyrin repeat	43	203	IPR036770	-
	Pte6g00737	216	ProSiteProfiles	Ankyrin repeat profile.	142	174	IPR002110	GO:0005515
	Pte6g00737	216	SMART	ANK_2a	142	171	IPR002110	GO:0005515
	Pte6g00737	216	SMART	ANK_2a	175	206	IPR002110	GO:0005515
	Pte6g00737	216	SMART	ANK_2a	75	104	IPR002110	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte6g00737	Pte-Chr6	13187192	13187842	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte6g00737	16	125	MAP Kinase Kinase Kinase	AT2G31800	31.624	1.08e-07	49.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte6g00737	-		-	csin:114255887	252.677

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