Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00726 ATGAAAACAAGAGCAGACGGAACGGATACCGGGTGGATCTCTGTATCTCTCAACTTGCCATTTCTGTTCTTGTGTCTTATTGTTTTGTGTTCGAGGATTGAGGTTTCTTATGGCCAAGCCACTGATGACACGAATTCAGACCAGGTTCCAACAGCTTCAGATAAGAATGCCACAGGTGAGCAGTCACCAGCAGCAAACGTTACATCAAACGAAGCTGGGGCACAAAGCGGAAATGGACCAGCAGGGAATCTAACAGCACCCCAAACTGAGAAAGACAGCTGTGATGGTATTTTCATGACCTACAACTTTTTATCTAGGGAGAAACTGTATCCACATGTGAAGAACATCTCAGCTCAGGCATGGGCGTTCAAGTCAGTAGCCACCATATTGAATGTCGGGACAGATGAGCTTAGGGGTTGGGGAATGTTCATCGGGTTCCAGCATAGAGAGATATTGGTCGATGCCGATGGGGGGATCCTTATGGACGCCGGCGACTTTCCAGCACAAGTTGGGAACGGGACAATCTTGGGAGGAAATCCAGTGCAAGACTTGAAGACTGCCATTGATACCGCTGGAGATTTGGAGCAGATTCAGGTGAAGGTCCAGCTTAAAGGCACACAATTTGGCCTTAAGCCGGGGGACATTCCAATGCCGAAGACAATCAAGCTTGAAAATGATGGCTACAAATGTCCAACACCCAAAATGCGTGGGACGACCGATATGTATGTATGTTGTGCCAGAGATCCTAAAGCCAAGGCCAAGGAAACCCGGAAGACCAGATTTCCTCCTCGTAAGAATGGAGATCTCACCATAACATATGATGTCCTCCAAGCCTATGGAAGGAACTATCTGGCTCAGGTAACCATAGATAACAACCATCCACTGGGTCGTCTGGACCATTGGAATTTGACATGGGAGTGGCAGCAGAATGAGTTTATTAGCTCAATGCGAGGAGCATACTCATACATGAGGGATCCTTCTTCATGTTTATATGGTCCAGCAGGGAAACACTATGATGACTTTGATTTCTCCAAGGCCGTGAGTTGTGACAAGAGGCCTATCATCACTGATCTTCCACCAGAGAGGAAAGAAGACAATGAAACTGGAAAACTACCTTATTGCTGCAAAAATGGGACTATCTTGCCCTCCTACCATGGACAAAGAACAAGCAAGGTCTATTTTCCAATTGCAGGTCCAAAAGCTCCCAACCTAATGACAACAGAACAAGTTTGA 1233 0.4647 MKTRADGTDTGWISVSLNLPFLFLCLIVLCSRIEVSYGQATDDTNSDQVPTASDKNATGEQSPAANVTSNEAGAQSGNGPAGNLTAPQTEKDSCDGIFMTYNFLSREKLYPHVKNISAQAWAFKSVATILNVGTDELRGWGMFIGFQHREILVDADGGILMDAGDFPAQVGNGTILGGNPVQDLKTAIDTAGDLEQIQVKVQLKGTQFGLKPGDIPMPKTIKLENDGYKCPTPKMRGTTDMYVCCARDPKAKAKETRKTRFPPRKNGDLTITYDVLQAYGRNYLAQVTIDNNHPLGRLDHWNLTWEWQQNEFISSMRGAYSYMRDPSSCLYGPAGKHYDDFDFSKAVSCDKRPIITDLPPERKEDNETGKLPYCCKNGTILPSYHGQRTSKVYFPIAGPKAPNLMTTEQV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00726 410 SUPERFAMILY Carbohydrate-binding domain 265 316 IPR008965 GO:0030246
Pte6g00726 410 Pfam COBRA-like protein 283 403 IPR006918 GO:0010215|GO:0016020
Pte6g00726 410 PANTHER COBRA-LIKE PROTEIN 7 56 405 - -
Pte6g00726 410 MobiDBLite consensus disorder prediction 40 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00726 Pte-Chr6 12369733 12371234 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00726 87 402 COBRA Gene Family AT3G20580 56.329 7.76e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00726 - - qsa:O6P43_000846 455.292