Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00704 ATGGACTCACACCAGCTTTCTGATTTCAGTGTGACAAGTGCAGGATTGCCTTACATCTCTCACCCCTCTGCTTTAACAATACCTTCTGAGCTGCTTGGATCCTTGAAATTTGATATTGGAGATTCCCCTAATTCACCTTTTTCTCATCACTTTGATTTTGATACTCGCTCTACACTAAGTGACAACCAGGAGCAGCATAGTTCTACAGGTATAACCACCGCTTGTATTACAGCAGAAACCTACAGCCACATACACCGACCAGCCTCATCTTTTGATCATTGGGAAGTTGTTGCCAAACACTGTTCTGGCAGCACTTCTTCACAGGATCCAAGTTGTAGCTCGGAAATGATATATGTCTTACAGGAGCTAGAGACCGCTTTAATGGCACCTGATGATGAAGACAACACCCTAGTTACACCATTTGCAGGAAGTGGCAAACAACGGACATTGGATCACAAATCTAGGTCATGGAGCCATGATCCCCAGCTTTCCCACGTAATTCAACCTCATTCACTTATTGTTTCTAATATCAGGCAGTCAAGTGAGTTTGGTCACATGGATAATGATCACATGATTTTGGAGGAAGCATCCGTGCAATCTTTTCCACAGAATAATTTGCAACAATTGTTGATTGCATGTGCTAAAGCTCTATCGGAAAACAACATTAGCTATTTCAACAAGCTAGTTAAAAGTGCTAGAAGTGCTGTATCTATCTGTGGGGAACCAATCCAACGGCTTGGTGCTTACATGGTGGAAGCGCTGGTTGCCAGGAAGGGAGGATCAGGGACTAACATTTATCATGCCCTTAGGTGTAGAGAGCCTGCAGGCAAGGATTTACTATCATACATGCACATGCTGTATGAAATCTGCCCTTACTTAAAGTTTGGCTATATGGCAGCCAACGGTGCAATTGCTGAAGCATGTAGAAACGAAGATCAAATTCATATTATAGACTTTCAAATTGCTCAGGGAACTCAATGGGTTACTCTTCTTCAAGCCCTTGCTGCTAGACCTGGTGGGGCTCCTTCTGTACGAATCACTGGGATTGACGATCCTGTTTCGAAATATGCCCGTGGTCAGGGATTGGAGGCAGTGGGCAAACGTTTAGCAGCTATTTCTGAAAAATTTGGCATCTTAGTTGAGTTTCATGGTGTGCCAGTTTTTGCTCCTGAAGTGACACCAGACATGCTAGATGTCAGGCCTGGGGAGGCTTTAGCAGTGAACTTCCCCTTGCAGCTTCACCATACCCCAGATGAGAGTGTTGATGTTAATAATCCAAGGGATGGTCTTTTACGAATGATTAAGTCACTTTCTCCCAAGGTAACAACTCTGGTGGAGCAGGAATCAAACACAAACACAACTCCTTTCTTCAATAGGTTTGTAGAAACTCTGGATTACTACCTGGCGATGTTCGAGTCTATCGATGCGGCGCTACCGAGAAACAGTAAGGAGAGGATTAATGTGGAGCAACATTGTTTGGCCAGGGATATTGTTAATATCATTGCTTGTGAGGGTAAGGATAGGGTGGAGCGCCATGAGCTGTTAGGCAAGTGGAAGTCCAGGTTGATAATGGCAGGTTTCAGATCATATCCTTTGAGCTCTTACGTGAATGATGTTATAAGAGGCCTGTTGAGAAGCTACTCCGAGCATTATACACTAGTTGAGAAGGATGATGCAATGCTTTTAGGTTGGAAGCATCGAAATCTAATTTCAGCTTCAGCCTGGCAGTGA 1731 0.4396 MDSHQLSDFSVTSAGLPYISHPSALTIPSELLGSLKFDIGDSPNSPFSHHFDFDTRSTLSDNQEQHSSTGITTACITAETYSHIHRPASSFDHWEVVAKHCSGSTSSQDPSCSSEMIYVLQELETALMAPDDEDNTLVTPFAGSGKQRTLDHKSRSWSHDPQLSHVIQPHSLIVSNIRQSSEFGHMDNDHMILEEASVQSFPQNNLQQLLIACAKALSENNISYFNKLVKSARSAVSICGEPIQRLGAYMVEALVARKGGSGTNIYHALRCREPAGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDQIHIIDFQIAQGTQWVTLLQALAARPGGAPSVRITGIDDPVSKYARGQGLEAVGKRLAAISEKFGILVEFHGVPVFAPEVTPDMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMIKSLSPKVTTLVEQESNTNTTPFFNRFVETLDYYLAMFESIDAALPRNSKERINVEQHCLARDIVNIIACEGKDRVERHELLGKWKSRLIMAGFRSYPLSSYVNDVIRGLLRSYSEHYTLVEKDDAMLLGWKHRNLISASAWQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00704 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 171 572 IPR005202 -
Pte6g00704 576 Pfam GRAS domain family 206 576 IPR005202 -
Pte6g00704 576 ProSiteProfiles GRAS family profile. 197 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00704 Pte-Chr6 11863484 11866442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00704 196 577 GRAS Transcription Factor Family AT5G48150 62.924 3.04e-176 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte6g00704 GRAS 1e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00704 - - qsa:O6P43_000870 801.971