Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00689 ATGGAAAATTTTACATTATTTTGCGTTCAGTTGATTCTATTTTTGTTCGTAAGGAGCTCAACTTCAACTGATGTTGATAGTATTACTCCAAGTCAATCTATTCCAGATGGTCAGACTTTAGTGTCAGCAGGTGGCAACTTTGAAGCAGGCTTCTTCAATTCTGGAAACTCAAAACATCGATACTTTGGTATATGGTACAAGAATATATCTCCTATAACACTTGTCTGGGTCGCTAACAGAGAAAAACCCTTCAACACTACATCAGGAGTTCTTCAACTCAATGATCAAGGAATTCTTTCCCTTGTAAATGAAACCAAGGGTACAGTTTGGTCATCTCATGTGTCAAGAAAAGCAATGAAACCTGTAGCGCAGATCTTGGATTCCGGAAATCTCATAGTGAAAGACACGAAAGGTAGGCTTCAAAACAATGTTTTGTGGCAGAGTTTTGAGCATCCATGTGATACATTATTACCAGGAATGAAGCTTGGCTGGAACTTAGAGACGGGTCTGAATATGTACTTGTCATCTTGGAAAACAACAGAGGATCCAGCTAAAGGTGAGTATATAGTTGAGATAGATTTTCATGGATACCCACAAATTAAACAGCTTAGAGGAGGTACGATAATGACGAGAGCTGGATCATGGAATGGTCTTCGGTTTACAGGGTATCCTGCTTTGAAGCCTAATCCCTTGTTCAACTATGAATTTGTGTTGAACGCTAAAGAGGTATATTATGAATACCAACTGCTTGACAAAACAGTTTACTCAAGATTCGTACTAACTCCCTTAGGCATTGGGCAACGGTTCATATGGACAAACAGGACACGCAGCTGGGAGCTTCATTCCAGTGGTCCCTTGGACCAGTGTCAAAACTATGCCCTTTGTGGTCCTTATAGTAGCTGCAATACTCAAATGGACCCTCCATGTTCGTGCTTGAAGGGATTCGTCCCCAAATCATCAGAACAATGGAAGGCATTTGATTGGTCTGGGGGCTGTGTTAGAAAGACTTCACTGAATTGCAATAATGAAGATGGTTTCCTACGGTACACTGGAATCAAATTGCCAGATACAACTTCTTCTTGGTATGATAAGAGCATAAACTTGATGGGATGCAAGAATTTATGTTTCAGGAACTGCTCTTGCACAGCTTATGCAAGTTTGGATGTTAGAGGTGGAGGAAGTGGCTGCTTGCTTTGGTTTGATGAGCTGGTTGACATGACAGAGTTCAGTGATGGTGGGCAAGACATTTATGTAAAAGTGGCAGCTCCAGACCTTGGTACACATAACATTAGTTGGAAGATAATAATAGCGGTTGCAATTGGTGCATCAGTATGTGTCTTTGGAGTTGGAATGGCCATATTCAAATCTAAGAAACAAGATAGTTCAGGGATAACAAAAGTATTCTGTGGGAAGTTTCAAAAGAAGAAACAAAAGAAGGAAGATATGGACTTACCAACTTTCGATTTGGCAACAGTAATCAAAGCAACCAGTAATTTTTCAAGCAGTACCAAATTAGGAGAAGGTGGGTTTGGACCTGTGTACAAGGGTACACTGAAAGATGGGCAAGAATTAGCTATCAAAAGGCTGTCGACCAATTCTGGACAAGGATTGAAGGAGTTTAAAAATGAAGTCATGCTGATAACCAAACTTCAACACCGCAATCTTGTGAAGCTTCTTGGCTGCTGCATTGAAGATGGTGAAAAGATGTTGATATATGAGTATATGCCTAACAAAAGCTTGGACCACTTTATTTTTGATGAAAGGAGAAGCAAACAGTTAGGCTGGCATAATCGCTTAGAAGTTATTGGGGGCATTGCACGGGGGCTACTTTATCTTCATCAAGACTCTAGACTAAGGATCATTCATAGAGATCTGAAAACGAGCAATATTCTTCTGGACACAAACTTGAATCCAAAAATATCAGACTTTGGCATGGCTTCAACATTTTGGGGAGATCAAGTTGAGGCCAACACCAATAGAGTTGCTGGAACATATGGTTATATGCCTCCTGAGTATGCAGTGCATGGACAGTTCTCTGTGAAATCAGATGTGTTCAGTTTTGGTGTTATAGTTTTAGAGATAGTAAGTGGACAAAAGAACAGAGAATTTTGTCGCCCACACCACAACCTTAATCTTCTTGGATATGCATGGGAACTTTGGATGGATGGAAGGCCATTGGAGCTAATGGATGAATCATTGGGTGATAGTTGCATTGAATCTGAAGTCTTGAGATGCATACACGTGGGCTTGTTATGTGTACAGCATGTACCAGAAGACAGACCTAACATGTCATCTGTGGTTCTAATGCTGAACGGAGAGAAAATGCTGCCTACTCCAAAGCATCCTGGTTTCTATGGCGGAAATGACATATCTGTAGCAGCATGTTCATCGAGAACACATGAAAGATATAATTCTTCGTCAAGAAAATGCGAACTTAGTATATCAAGTGAGATCACAATCACAACGCTAGATCCAAGATAG 2481 0.4047 MENFTLFCVQLILFLFVRSSTSTDVDSITPSQSIPDGQTLVSAGGNFEAGFFNSGNSKHRYFGIWYKNISPITLVWVANREKPFNTTSGVLQLNDQGILSLVNETKGTVWSSHVSRKAMKPVAQILDSGNLIVKDTKGRLQNNVLWQSFEHPCDTLLPGMKLGWNLETGLNMYLSSWKTTEDPAKGEYIVEIDFHGYPQIKQLRGGTIMTRAGSWNGLRFTGYPALKPNPLFNYEFVLNAKEVYYEYQLLDKTVYSRFVLTPLGIGQRFIWTNRTRSWELHSSGPLDQCQNYALCGPYSSCNTQMDPPCSCLKGFVPKSSEQWKAFDWSGGCVRKTSLNCNNEDGFLRYTGIKLPDTTSSWYDKSINLMGCKNLCFRNCSCTAYASLDVRGGGSGCLLWFDELVDMTEFSDGGQDIYVKVAAPDLGTHNISWKIIIAVAIGASVCVFGVGMAIFKSKKQDSSGITKVFCGKFQKKKQKKEDMDLPTFDLATVIKATSNFSSSTKLGEGGFGPVYKGTLKDGQELAIKRLSTNSGQGLKEFKNEVMLITKLQHRNLVKLLGCCIEDGEKMLIYEYMPNKSLDHFIFDERRSKQLGWHNRLEVIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDTNLNPKISDFGMASTFWGDQVEANTNRVAGTYGYMPPEYAVHGQFSVKSDVFSFGVIVLEIVSGQKNREFCRPHHNLNLLGYAWELWMDGRPLELMDESLGDSCIESEVLRCIHVGLLCVQHVPEDRPNMSSVVLMLNGEKMLPTPKHPGFYGGNDISVAACSSRTHERYNSSSRKCELSISSEITITTLDPR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00689 826 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pte6g00689 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 761 - -
Pte6g00689 826 ProSiteProfiles Protein kinase domain profile. 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00689 826 Pfam D-mannose binding lectin 73 178 IPR001480 -
Pte6g00689 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 574 - -
Pte6g00689 826 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Pte6g00689 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Pte6g00689 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 420 - -
Pte6g00689 826 SMART blect_4 31 152 IPR001480 -
Pte6g00689 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Pte6g00689 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Pte6g00689 826 CDD B_lectin 31 152 IPR001480 -
Pte6g00689 826 CDD STKc_IRAK 505 772 - -
Pte6g00689 826 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00689 826 Gene3D - 20 149 IPR036426 -
Pte6g00689 826 Pfam Protein tyrosine and serine/threonine kinase 502 766 IPR001245 GO:0004672|GO:0006468
Pte6g00689 826 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Pte6g00689 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Pte6g00689 826 Gene3D Hepatocyte Growth Factor 336 418 - -
Pte6g00689 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pte6g00689 826 SUPERFAMILY Protein kinase-like (PK-like) 483 770 IPR011009 -
Pte6g00689 826 CDD PAN_AP_plant 336 421 - -
Pte6g00689 826 SMART ntp_6 341 420 IPR003609 -
Pte6g00689 826 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Pte6g00689 826 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Pte6g00689 826 Pfam PAN-like domain 340 406 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00689 Pte-Chr6 11470074 11474248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00689 430 785 Receptor kinase-like Gene Family AT4G23190 50.681 1.07e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte6g00689 PK_Tyr_Ser-Thr 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00689 - - cave:132173741 1002.66