Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00674 ATGGCCGGTGGTGATGCTGATAAGAAGGTCTCTCGTGCTTCATCAAACGAGAAAATGACTTGCTTTCATTGCAAAGGGAAGGCAACGAGCTTGAGAAAAGGCTGGCAGCTCCGAAGTGGCGCTTTCACTCAGCTCTGTGACCGATGCGGTTCTGCTTTTGAGGAGGGAATGTTCTGTGAAAGCTTTCACCAAGACTTGGATGGTTGGAGGGATTGTGTATCCTGTGCAAAGAGGATACATTGTGGATGTATCATGTCAGCTCACATGCTCGTGACATTAGATTATGGAGGGATGTGTTGTGCAGATTGCTGTAAGAAAGATATTGATCAGGCAGATATTAAGTACATTACCCAGACTGCTACCCCAGATTTCTGGCACAATTTTACTCTAGAATTGGCTAGAAGACCAAGCCTCAAAGTGGGCAAGGCATTTGACCTGGAAGACAAATTGATGAGAGGCGATTTGCCTCTTGCTCTTAGTGACCAAGAAACCAATTATGTGGGTGATCCAAGTACATCATTTGATTCGTTTGGGACTCTAGAAGCACGAGATCCTGTTGTACCCCCAGGAGAACAAGTGAATACTGAGATTCAAAGATCTGAAGGGGCCTCTTCTGGGCTGAAAAGTCCAGGAAACTTGCCTCTGGCGAGCCTTGAGGAGCTGTCAAAAGCCCCTAGAGACTCAAAATCTGTGCTTGTTCCTTTGTTTACTGCGACATTAACTGTCAGTGATGCCGAACTGAAGAATGCACATCTGGTGATTCCAAAGAAATATGCTGAGGCATTTTTTCCAAAAGTTTCCGAGCAGCAAGAACTTCCAGTTTCTGTTCAGGATACCCTAGGCAAAGATTGGAATTTTCAGTTCCATTTTTGGGCCAATTTAAATGGCGAGGACAAGGCTTATACTTTAGAAGGACTCAGAGATTATATGGTTACAATGCAGTGGCAACCTGGTGACATTGTCGAGTTTTTCAGCAAAGAACCAGAAGGGAAGATGGTGATAGAAACCAAAAAGGCTTCTGGTTCTACTGTTCAGTCATCTTTGGAGGATTAG 1053 0.4454 MAGGDADKKVSRASSNEKMTCFHCKGKATSLRKGWQLRSGAFTQLCDRCGSAFEEGMFCESFHQDLDGWRDCVSCAKRIHCGCIMSAHMLVTLDYGGMCCADCCKKDIDQADIKYITQTATPDFWHNFTLELARRPSLKVGKAFDLEDKLMRGDLPLALSDQETNYVGDPSTSFDSFGTLEARDPVVPPGEQVNTEIQRSEGASSGLKSPGNLPLASLEELSKAPRDSKSVLVPLFTATLTVSDAELKNAHLVIPKKYAEAFFPKVSEQQELPVSVQDTLGKDWNFQFHFWANLNGEDKAYTLEGLRDYMVTMQWQPGDIVEFFSKEPEGKMVIETKKASGSTVQSSLED* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00674 350 Gene3D - 215 342 IPR015300 -
Pte6g00674 350 CDD B3_DNA 234 335 IPR003340 GO:0003677
Pte6g00674 350 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 201 343 - -
Pte6g00674 350 SUPERFAMILY DNA-binding pseudobarrel domain 234 334 IPR015300 -
Pte6g00674 350 ProSiteProfiles B3 DNA-binding domain profile. 237 340 IPR003340 GO:0003677
Pte6g00674 350 SMART B3_2 236 340 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00674 Pte-Chr6 11232754 11246027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00674 24 344 B3 DNA Binding Superfamily AT4G32010 29.211 2.45e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00674 - - qsa:O6P43_029042 268.085