Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00673 ATGATGATGTTATCGCCGTCCTCGTTGATGAGGAGTTCGTTAGAAGAAATGTTGGAGTCACTTCGCCGGAGAGATGAAGAAGAGAAGCCGAAGGACTTGCCACCGTCATTGCCAACTAGGCCAACTTCAAAAGCTCGGTTACCGTCGACGAGGAGGGCGTTGCCGGATGAGTTGAAAGTCAATGATTCTGGAGCTGGCGTTGGAAATAGGAGCTCAAAGAGCAGTGGCTTTGGTAAAGCAGAGAGTAGCAAGAGGAAAGAGAAAGGCTTAGGTATGAAGAGAGGTAATATCGGAAACAAAAAGACGAAGAAGGACGCCGAATCACCTTATGTTATCACCACGACCACTACGGAGAACGATAAGAGTGATAGATTAGAAGAACCACCTTCAACTACTTCTTCTCAATCTGCGTCATCGCAGAAGGTTGGAGAGTCGGAATGGGATGATGATATTGGTTATTTCATGAAAAAGAAACTTCGTGTTTGGTGTAGGCAATCCAGTGGAAATTGGGGATTAGGAACAATACAGTCGACACTGGGTGAGGAGGCCTCTGTCTCTCTCTCTAATGGCAACGTGATGAACGTGAAGACCGGACAGCTATTTCCCGCTAATCCAGAAATTCTGGAGGGCGTGGATGATCTCATACAGCTTAGTTATTTAAATGAGCCTTCAGTACTTCACAACCTTCGGTTTAGATACTCCCGAGATATGATTTATACCAAAGCAGGACCTGTTTTGATAGCGTTGAATCCCTTCAAAGATCTACAATTATATAAAAATGATCATATCTCATCCTACAGACAGAAATTGTCAGATAGTCCACATGTTTATGCAATTGCGGATACAGCTTATACTGAGATGGTGAGAGTGTATCCCCTTTACAGTGGTGAAAGTGGGGCTGGGAAGACAGAGACAGCAAAAATCACGATGCATTACTTAGCTACTGTAAGTGGCGGCAGTGGTGGGATTGAAAATGATATTCTTCAGACAAATTATATACTGGAAGCCTTTGGGAATGCCAAAACATCTCGGAATGATAACTCAAGCCGATTTGGAAAGTTGATTGAAATTCATTTCAGCACCCTGGGGAAGATATGCGGTGCTAAAATTCAAACCTGTAAGGAACTTATGCCATTCTCTAGAGTTGTTCAACTGGCCAATGGTGAGAGGTCATATCACATATTTTATCAACTCTGCGCTGGAGCTTCATCAGCTCTTAAAGAGAGGCTGAACCTTAGAATGGCCAGTGAATATAATTACCTCAATCAGAGTGAGTGCATAACAATCAGCGGTGTTGATGATTCTGAAAAGCTCCGAAAGCTCATGAAATCCCTGAATGTTGTCAGAATATGCAAAGATAATCAAGAGCGTTTGTTTGAGGTTCTTGCTGCTATATTATGGCTCGGAAACATATCATTCAAAGTAGTCGAGAATGAAAATCATGTCGAGGTTGTAGCTGATGAAGCTGTGACCAATGCCGCAAAACTCATGGATTGCAATTCCCAGGAGCTGATGATAGCTTTAACTACTCATAAAATTCAATGTGGAAAGGACACGATTTCCAAAAAATTGACTCTGAGACAGGCAATTGACACTAGAGATGCTTTGGCAAAATTTATGTATGCAAGCTTGTTCAACTGGCTTGTAGAACAAATTAACAACTCTCTGGAAGTGGGTAAACAATGTACAGGAAGATCCATAAGCATTCTTGACATATATGGCTTTGAATCATTTCAGAGGAATAGCTTTGAACAATTCTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAAGAGGGTTATGAATTGGATGGAATCGATTGGACTAAAGTCCATTTTGAAGACAATCAGGAATGCCTTGACCTTTTTGAAAAGAAACCATTAGGGCTACTCTCTTTGCTAGATGAGGAATCAAATTTCCCCAGGGCCACTGATTTGACATTCGCCAATAAACTTAAGCAGCATTTGCATACTAATACTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTCCGTGTTTGCCATTATGCGGGAGAGGTACTCTATGATACCAATGGGTTTCTTGAAAAGAACAGAGATCCCATGCATTCTGATTCCATTCGATTCCTTCTGTCATGCAACTCTCAGCTGCTTAAGGTGTCTGCCACCAAAATGCTTCAGCAGATGGGAGCACTGGACGCACAGAAGCAGAGCGTTGGTACAAAGTTTAAGGGTCAATTGTTCAAGTTAATGAATCAGTTGGAAAGCACATCTCCTCACTTTATTCGATGCATAAAGCCTAATAGCAAGCATCTCCCAAGAGTATACGATGAACAACTTGTCTTGCAGCAGCTTAGGTGCTGTGGAGTTGTGGATGTGGTTAGGATTTCAAGATCTGGATATCCTACGAGGATGACTCATCAAGAGTTTGCAGAAAGGTATGGATTTCTATTCGCGGAGGCTAGTTTATCAAAGGATCCTTTAAGTATTTCTGTTGCTGTTCTGCAACACTTCAATATACAACCAGAAATGTACCAAGTTGGTTATACCAAAGTGTATCTCCGGGCAGGGCAGATTGGTACTCTGGAGAATAGAAGAAAACAAGTTGTTCTTGGTGTACTCGGTATTCAGAAACAATTTCGTTGTCGCAAGGCTAGTCAACATTTCCAATATCTGCGGAATGGAGCACTGATATTGCAATCATTTGTCCGTGGAGAAATTGCAAGAAAGAAATACAGTGTCATGGCTACCAGTTCTTTGCCTTGTCAAACAGACGAGGAGATCCAGGCCATCATTCAACTACAATCTGTATTCCGTGGATGGCTTGTTCGAAGGAATGCCAGCACCCTTGGTAACAATAAAGGAAGCCCGGGAAGTGCAAAATCTAGACGCAAGGCACGTGGCAAAGTCTCAGTACCGAGGGATTTGTCAAAAGAGAAAAATCTGCCTTCAGAGGTAGCAGAGCTCCAAAAAAGAGTTTTAAAAGCAGAATCTGCTCTGGAGAAAAAAGAGGAGGAAAACGCTGCTCTCGGGGAGCAACTTAAACAGTTTGAAAAGAGATGGCTTAATTATGAGATGAAGATGAAATCAATGGAGGAGATGTGGCAAAGGCAGATGTCATCTTTACAAATGAGTCTTGCTGCTGCTAAGAAGAGCCTTGCTGTTGATGATTGTAGTGGTGTTCAACATGCAAGGGTTGATTGCTCATCAGTTCGTAGCTATGATTCTGAGGATGTTACTGCCATCGGATCTCGCACTCCTAGTGCAAGTACACCTATAAAATTTTCTAGCAGGCTTTCTGATTCTGGACGACGAGATGCTAATCGTTCACTGAAAGCAGTCGGTAGTCTGGCAAAGGAATTTGACCGCTACAGACATACATTTGATGACGAAGCCAAAGTTCTAAGTGACATCCAAACAAGGAAGCCTGCTAATGTTAATCCAGAAGAAGAACTTAGAAAACTTAAATATAGATTTGAGGCGTGGAAGAAAGATTACAAGTTTAGACTGCGGGAGACAAAGGCGAGGCTTCAAAAACTAGGTAATTCAGAAGTAGATAAAGGTCTACGGAAGTGGTGGAGTAAAATAAGCACAAGGGTACACAACTAA 3615 0.4213 MMMLSPSSLMRSSLEEMLESLRRRDEEEKPKDLPPSLPTRPTSKARLPSTRRALPDELKVNDSGAGVGNRSSKSSGFGKAESSKRKEKGLGMKRGNIGNKKTKKDAESPYVITTTTTENDKSDRLEEPPSTTSSQSASSQKVGESEWDDDIGYFMKKKLRVWCRQSSGNWGLGTIQSTLGEEASVSLSNGNVMNVKTGQLFPANPEILEGVDDLIQLSYLNEPSVLHNLRFRYSRDMIYTKAGPVLIALNPFKDLQLYKNDHISSYRQKLSDSPHVYAIADTAYTEMVRVYPLYSGESGAGKTETAKITMHYLATVSGGSGGIENDILQTNYILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTCKELMPFSRVVQLANGERSYHIFYQLCAGASSALKERLNLRMASEYNYLNQSECITISGVDDSEKLRKLMKSLNVVRICKDNQERLFEVLAAILWLGNISFKVVENENHVEVVADEAVTNAAKLMDCNSQELMIALTTHKIQCGKDTISKKLTLRQAIDTRDALAKFMYASLFNWLVEQINNSLEVGKQCTGRSISILDIYGFESFQRNSFEQFCINYANERLQQHFNRHLFKLEQEGYELDGIDWTKVHFEDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTFANKLKQHLHTNTCFKGERGRAFRVCHYAGEVLYDTNGFLEKNRDPMHSDSIRFLLSCNSQLLKVSATKMLQQMGALDAQKQSVGTKFKGQLFKLMNQLESTSPHFIRCIKPNSKHLPRVYDEQLVLQQLRCCGVVDVVRISRSGYPTRMTHQEFAERYGFLFAEASLSKDPLSISVAVLQHFNIQPEMYQVGYTKVYLRAGQIGTLENRRKQVVLGVLGIQKQFRCRKASQHFQYLRNGALILQSFVRGEIARKKYSVMATSSLPCQTDEEIQAIIQLQSVFRGWLVRRNASTLGNNKGSPGSAKSRRKARGKVSVPRDLSKEKNLPSEVAELQKRVLKAESALEKKEEENAALGEQLKQFEKRWLNYEMKMKSMEEMWQRQMSSLQMSLAAAKKSLAVDDCSGVQHARVDCSSVRSYDSEDVTAIGSRTPSASTPIKFSSRLSDSGRRDANRSLKAVGSLAKEFDRYRHTFDDEAKVLSDIQTRKPANVNPEEELRKLKYRFEAWKKDYKFRLRETKARLQKLGNSEVDKGLRKWWSKISTRVHN* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00673 1204 Pfam IQ calmodulin-binding motif 897 914 IPR000048 GO:0005515
Pte6g00673 1204 Pfam IQ calmodulin-binding motif 931 948 IPR000048 GO:0005515
Pte6g00673 1204 MobiDBLite consensus disorder prediction 951 980 - -
Pte6g00673 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 917 IPR027417 -
Pte6g00673 1204 PRINTS Myosin heavy chain signature 289 314 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 PRINTS Myosin heavy chain signature 332 359 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 PRINTS Myosin heavy chain signature 619 647 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 PRINTS Myosin heavy chain signature 239 258 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 PRINTS Myosin heavy chain signature 566 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 SMART MYSc_2a 203 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 Gene3D Kinesin motor domain 208 802 IPR036961 -
Pte6g00673 1204 Gene3D Myosin VI head, motor domain, U50 subdomain 447 555 - -
Pte6g00673 1204 Pfam Myosin head (motor domain) 211 857 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 ProSiteProfiles IQ motif profile. 894 923 IPR000048 GO:0005515
Pte6g00673 1204 FunFam Unconventional myosin-XIX 578 759 - -
Pte6g00673 1204 PANTHER MYOSIN 202 1197 - -
Pte6g00673 1204 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 156 205 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 SMART iq_5 928 950 IPR000048 GO:0005515
Pte6g00673 1204 SMART iq_5 870 892 IPR000048 GO:0005515
Pte6g00673 1204 SMART iq_5 893 915 IPR000048 GO:0005515
Pte6g00673 1204 MobiDBLite consensus disorder prediction 128 142 - -
Pte6g00673 1204 Coils Coil 988 1022 - -
Pte6g00673 1204 ProSiteProfiles IQ motif profile. 929 958 IPR000048 GO:0005515
Pte6g00673 1204 MobiDBLite consensus disorder prediction 16 34 - -
Pte6g00673 1204 Gene3D - 803 870 - -
Pte6g00673 1204 Gene3D - 578 759 - -
Pte6g00673 1204 FunFam Myosin heavy chain 390 446 - -
Pte6g00673 1204 Gene3D - 390 446 - -
Pte6g00673 1204 FunFam Myosin IE heavy chain 447 555 - -
Pte6g00673 1204 CDD MYSc_Myo8 223 857 IPR036022 -
Pte6g00673 1204 Gene3D - 875 921 - -
Pte6g00673 1204 MobiDBLite consensus disorder prediction 1 144 - -
Pte6g00673 1204 ProSiteProfiles Myosin motor domain profile. 209 869 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00673 1204 MobiDBLite consensus disorder prediction 79 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00673 Pte-Chr6 11209750 11220744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00673 1 1197 Myosins gene family AT5G54280 60.212 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00673 K10357 - qsa:O6P43_029040 1596.25