Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00672 ATGCTTGGAGCACTAGGGTGCATCACCCCGGAAATCCTTGAGAAATGGGTACGGGTAGACTTCAAAGAACCATTTCGGTTCAAAGCAGGAGCTCAAATTTTCTCAGACGGTGGATTGGACTACTTGGGCAACCCAAACCTTGTTCATGCGCAAAGCATTCTAGCTGTGTTAGGCTTCCAAGTTGTGCTTATGGGTCTCGTTGAAGGGTTCCGTATCAATGGCCTTCCTGGTGTAGGAGAGGGGAATGACCTATACCCAGGTGGGCAATACTTCGATCCTCTTGGTCTTGCTGATGACCCTGTGACATTTGCTGAGCTCAAGGTAAAGGAAATCAAGAATGGCCGGCTAGCTATGTTTTCGATGTTTGGTTTCTTTGTCCAAGCCATAGTCACAGGAAAGGGACCGCTAGAAATTTTATTGGATCACTTGTACAATCCTGTGGCAAACCATGCATGGGTCTACGCCACCAAGTTTGTTCCCGGATCTTAA 489 0.4744 MLGALGCITPEILEKWVRVDFKEPFRFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEILLDHLYNPVANHAWVYATKFVPGS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00672 162 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 161 IPR001344 GO:0009765|GO:0016020
Pte6g00672 162 SUPERFAMILY Chlorophyll a-b binding protein 1 159 - -
Pte6g00672 162 Gene3D Chlorophyll a/b binding protein domain 1 155 - -
Pte6g00672 162 Pfam Chlorophyll A-B binding protein 1 128 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00672 Pte-Chr6 11208393 11208881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00672 1 163 Chloroplast and Mitochondria Gene Families AT2G05070 73.171 5.38e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00672 K08914 - cit:102625194 316.235