Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00668 ATGTTCTTCGAGTTGTCTTCTACGTACCAAACAATTTTTTATCCAACTTTTCCATTTGAATATGCTCTCACTCTTGATATTGTAATCGCTATATTTTTCTGCGGCATAGTAGCTCTCTTCTTAATCATCCTCTATCACATTCTCACTGAATTTTGGCAATGGTTCTGGGAAGAAATTGCTGATCAAGAAGACCTTGAAGAAGGAAATAATGCAGAAAGTGTCTCAAACTCGTCTCAGCAGATTGCATTTCTTCAATTCATGGTCCAAACCAACCTGCAGGTGTTAAGAATGTTGGAAACGGTAATGAGGGATATAGAGGAAAGGAGAGGGAATCGACAAATAGCCATGGCGAAATTACCACCTCTGGTGAATTATGGAAGCCATGATCATGCAGCAACAAGTTGTGCTGCATGTACCATCTGCTTGGAGGACTTCAAGTCTGGGGAGCCTTGTCAAGTTTTTCCAGTGTGCAAACATATTTTTCATTCTGGCTGCATCCATGACTGGTTGAAGAAGAAGCTCACCTGTCCTATTTGTCGATATTGTATAAAAGATAAATGA 561 0.3993 MFFELSSTYQTIFYPTFPFEYALTLDIVIAIFFCGIVALFLIILYHILTEFWQWFWEEIADQEDLEEGNNAESVSNSSQQIAFLQFMVQTNLQVLRMLETVMRDIEERRGNRQIAMAKLPPLVNYGSHDHAATSCAACTICLEDFKSGEPCQVFPVCKHIFHSGCIHDWLKKKLTCPICRYCIKDK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00668 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 185 IPR013083 -
Pte6g00668 186 SMART ring_2 138 179 IPR001841 -
Pte6g00668 186 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Pte6g00668 186 CDD RING-H2_PA-TM-RING 138 180 - -
Pte6g00668 186 Pfam Ring finger domain 137 180 IPR001841 -
Pte6g00668 186 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 27 181 IPR044675 -
Pte6g00668 186 SUPERFAMILY RING/U-box 137 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00668 Pte-Chr6 11051123 11051683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00668 107 180 C3H Transcription Factor Family AT1G53010 43.038 3.61e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00668 - - cave:132174479 168.318