Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00665 ATGGAGTTCATTGTTGCTCACCATCCAGGAGCTGGGACGATTCCAAAATCCATTACAGGGGAGCATATTGCAGCAGGGTGGCCCTCATGGTTGGCTTCAGTGGCTGGGGAGGCTATCCAGGGTTGGTTACCACGACAGGCGGATTCTTTTGAGAAACTAGATAAGATTGTCCAGGGAACATACGGTAACGTCTACCGGGCTCGTGATCTTGAGCAAAAGAAAATCGTTGCTTCGAAGAAAATAAGGTTTGACAACTTAGAGCCTGAGAGTGTGCACTTTATGGCAAGGGAAATACACATTCTGCGTAGACTCAACCATCCCAATGTGATAAAACTTGAAGGTCTTGTTACATCAAGAATGTCTTACAGATTGTACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACACCCTGGAGTAAAGTTTACTGAAGCTAAGGCATTTATCGTTAAGTGTTCTGTGCAGCAACTTCTGCGTGGACTTGGTCATTGTCATACTCGTGGCATTCTCCATCATGATATTAAGGGTTCTAACCTATTGATTGACAACAATGGGATTTTGAAGATTGCAGACTTTGGTCTAGCAAGTTCTTTTGATCCCCTACAGAGGCAACCACTAACTAGTCGGGTGGTGACTCTTTGGTATCGTCCACCAGAGCTTTTGCTTGGAGCCACTTATTATGGGACTGCTGTAGATTTGTGGAGTACAGGTTGCATTCTTGCTGAGTTAGGTTACTGGAGAAAATCTAAGTTGCCTCATGCTACTATCTTTAAGCCTCAACAGCCATATAGAGGGTGTGTTGCAGAAACATTTAAGGAATTCCTTACACCAGCATTAGCTCTTATGAACATTTTACTTTCCATAGACCCTGCTGATCGTGGGACTGCAGCTTTTACTCTGGATAATGAGTTTCGTCTCCCTCCCAAACTCGCTGACTCTCAGACTGTTCATGCTCCAATCTCCCTTCATCTTCTCCCCAAGAAATCTCTGCCTTCCTTCCCTGTCACTCTCTGCTCCACTCAATCGATTGACATTGCAGCCTCGAATCAATCTTCTCCAACCTAG 1077 0.4485 MEFIVAHHPGAGTIPKSITGEHIAAGWPSWLASVAGEAIQGWLPRQADSFEKLDKIVQGTYGNVYRARDLEQKKIVASKKIRFDNLEPESVHFMAREIHILRRLNHPNVIKLEGLVTSRMSYRLYLVFEYMEHDLAGLASHPGVKFTEAKAFIVKCSVQQLLRGLGHCHTRGILHHDIKGSNLLIDNNGILKIADFGLASSFDPLQRQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELGYWRKSKLPHATIFKPQQPYRGCVAETFKEFLTPALALMNILLSIDPADRGTAAFTLDNEFRLPPKLADSQTVHAPISLHLLPKKSLPSFPVTLCSTQSIDIAASNQSSPT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00665 358 FunFam probable serine/threonine-protein kinase At1g54610 37 132 - -
Pte6g00665 358 SMART serkin_6 50 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00665 358 SUPERFAMILY Protein kinase-like (PK-like) 44 308 IPR011009 -
Pte6g00665 358 ProSiteProfiles Protein kinase domain profile. 50 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00665 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pte6g00665 358 Gene3D Transferase(Phosphotransferase) domain 1 133 323 - -
Pte6g00665 358 Pfam Protein kinase domain 50 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00665 358 PANTHER CELL DIVISION PROTEIN KINASE 48 308 - -
Pte6g00665 358 Gene3D Phosphorylase Kinase; domain 1 37 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00665 Pte-Chr6 11020696 11023072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00665 42 308 Core Cell Cycle Gene Families AT5G10270 45.981 3.82e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte6g00665 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00665 - - mnt:21404350 511.146