Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00650 ATGGAGCAACAGATGGTAGATGTGGAGTCTCAAAGAAACGGAAAAACAAGCCTGGATACCTATAACATTTTCAAGACTCCAAATAGTCCCGTTACATTGAAGTTTGAAGATGTTGTCTACAAGATCAAAACCAAGAAAGGAGGGATACTTAGCAAAGGTGATCACAACTCACAAGAAAAGGTAATATTGAAAGGTGTCACAGGAATAGTAAAACCTGGCGAGATGTTAGTCATGTTGGGTCCATCGGGGAGTGGCAAAACAACTCTTTTGACAGCACTAGGTGGCAGGCTTGGTGGGAAGCTCAATGGAACCATAAGCTACAATGGGAAACCCTTCTCCAATATAATGAAGAGGAACACAGGATTTGTAACACAAGATGATGCGCTTTTCCCACATTTGACTGTCACTGAAACCTTAGTATTCACCGCACTACTTAGGTTACCCAATAGTCTGACCAAAGGAGATAAGATCTTGCATGCTGAAGCAGTGATAACTCAACTGGCTTTGACGAAGTGTAAGAATAGCATAATCGGAGATTCATTGCTAAGAGGGGTTTCAGGTGGAGAGAGAAAACGGGTTAGCATAGGCCAAGAAATGCTTATCAACCCCAGCTTGCTGTTCTTGGATGAGCCAACATCAGGTCTGGATTCTACTACAGCTCAAAGGATTGTGTCAATTTTGTGGGAGCTAGCAAATGGAGGAAGAACTATCGCCATGACTATTCATCAACCTTCAAGTAGGCTGTTCTATATGTTTCATAAAGTGTTGCTTTTGTCTGACGGTAACCCTTTGTACTTTGGTAAGGGATCAGAAGCTATGGAATATTTTGAAAGCATTGGATACGTGCCTTCTATTGCTATGAATCCATCTGATTTTCTTTTAGACCTTGCCAATGGTATTCCCTCTGATGAATTATTTGGAGACCAAGCCATGATTAAGCAGAAGTTAATATCTGCATACGAGACTAACCTAGCTCACAGAGTGAAGTCTGAATTCCATGAGGTGAATGGCATCAATAAATTTCAAGATGATTTTCAACAAACTAATACTGAAAGATGGGCTACAACATGGTGCCAACAATTTACTGTCTTGCTTACTAGAGGTATGAAAGAGAGGAAGCATGAGTCTTTCTCTGGCCTCAAGATTGGCCAGGTTACTGTTGTAGCTCTCATTTCTGGATTACTTTGGTGGAAATCCGACCTTGCACACTTGCAAGATCAGATTGGACTTCTCTTCTTTATATCTGGGTTCTGGGGATTCTTTCCACTCTTTCAAGCCATATTCACATTCCCAGAAGAACGCATCATACTTGAAAAGGAACGAAGCTCTGGAATGTACAGGCTATCATCTTACTTCATATCAAGGACGGTAGCTGATCTTCCAATGGAGCTTGTCCTGCCCACTGCATTTCTCTTGATCACATATTGGATGGCGGGGCTTAAAGCCACTGTAGGAAACTTCTTATTCACATTGGTTGCCCTTCTACTGACAGTACTAGTTGCTCAAGGTCTAGGCCTTGCTCTTGGAGCTTTGGTTATGGATCAAAAGGCTGCATCTACCTTAGGCTCCGTGCTCATGCTGTCATTCTTGTTAGCTGGAGGATTCTACGTCCAACATGTGCCACCCTTCATAGCATGGATCAAATACATCTCTTTAAGCCATTTTTCATATAAACTCTTGATGGGGTCTCAGTATGAAAGTGATGAGACATATCCATGTGACAATTCGGTTGGCTTTTGTTTAGTTTCTGAGTATCCTACAATAAAACAGGTCGGGTTAGACGGACAAGCTATCTCAGCTTTAGCTCTTTTATTAATGCTTCTAGGGTATAGACTTGTTGCTTATATTGCTCTCATGAGAGTAGGAGTTACAAAGAAATCGGCATAG 1887 0.4165 MEQQMVDVESQRNGKTSLDTYNIFKTPNSPVTLKFEDVVYKIKTKKGGILSKGDHNSQEKVILKGVTGIVKPGEMLVMLGPSGSGKTTLLTALGGRLGGKLNGTISYNGKPFSNIMKRNTGFVTQDDALFPHLTVTETLVFTALLRLPNSLTKGDKILHAEAVITQLALTKCKNSIIGDSLLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSILWELANGGRTIAMTIHQPSSRLFYMFHKVLLLSDGNPLYFGKGSEAMEYFESIGYVPSIAMNPSDFLLDLANGIPSDELFGDQAMIKQKLISAYETNLAHRVKSEFHEVNGINKFQDDFQQTNTERWATTWCQQFTVLLTRGMKERKHESFSGLKIGQVTVVALISGLLWWKSDLAHLQDQIGLLFFISGFWGFFPLFQAIFTFPEERIILEKERSSGMYRLSSYFISRTVADLPMELVLPTAFLLITYWMAGLKATVGNFLFTLVALLLTVLVAQGLGLALGALVMDQKAASTLGSVLMLSFLLAGGFYVQHVPPFIAWIKYISLSHFSYKLLMGSQYESDETYPCDNSVGFCLVSEYPTIKQVGLDGQAISALALLLMLLGYRLVAYIALMRVGVTKKSA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00650 628 Gene3D - 50 280 IPR027417 -
Pte6g00650 628 CDD ABCG_EPDR 30 267 - -
Pte6g00650 628 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Pte6g00650 628 Pfam ABC-2 type transporter 242 301 IPR043926 GO:0140359
Pte6g00650 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 285 IPR003439 GO:0005524
Pte6g00650 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 280 IPR027417 -
Pte6g00650 628 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Pte6g00650 628 FunFam ABC transporter G family member 22 50 279 - -
Pte6g00650 628 SMART AAA_5 72 262 IPR003593 GO:0016887
Pte6g00650 628 Pfam ABC-2 type transporter 359 564 IPR013525 GO:0016020|GO:0140359
Pte6g00650 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00650 Pte-Chr6 10672720 10675654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00650 62 261 Calmodulin-binding Proteins AT2G36910 24.757 2.82e-10 61.6