Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00649 ATGGAGACTACTCATTCTTCAACCACCTCGCAACATCCTAACCTCCCTCCTGGTTTCCGTTTCCACCCCACCGACGAAGAACTAGTGATTCACTACCTTAAGAGAAAAGCCTCTTCTGCTCCTCTACCTGTTGCAATAATCGCTGAGGTTGATCTGTACAAGTTCGATCCATGGGAGCTTCCAGCTAAGGCAAGTTTCGGAGAGCAGGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAATACCCAAATGGTGCGAGGCCAAACCGGGCTGCGACATCCGGTTACTGGAAGGCGACCGGAACAGATAAGCCGGTGTTAACATCAGGTGGGACTCAAAAAGTTGGGGTGAAGAAAGCTTTGGTGTTTTATGGAGGGAAGCCACCCAAAGGTGTGAAGACCAATTGGATCATGCATGAGTACAGGCTAGCTGATAATAAGACCAACGTTAAGCCACCTGGTTGTGACTTGGGTAACAAGAAAAACTCTTTGAGGCTTGATGACTGGGTACTATGTCGAATCTACCAGAAAAACAATACGCACAGATCACCTATGGATCATGACAGGGATGATACAATTGATGATATGATGGGACGGATACCTCCATCGATCAACGTGGGCCAAATGAATATGAGACTGCAACTTCCAAAGTTGTCAACAACCTATGCAGGTGCACTGTTAGAGAATGATCATAATTTAATGGAAGGGATAATATGCCATGGTGGGATGAACACATGTGCCATTACATCTCCATTGGCTAATTCTATTTCTACCTCCAAGAGTACTGAGCAGATTCCTCTAGGCCCCACCCTGGCCAACACTTCAAACTCTCTGCCACCAAAGAGAACCCTCACTTCTCTGTATTGGAACGATCATGATCATCAGGACCTGGCTGGGGATGCAGGAGCATCAGGAAATAAGAGAGTGAACAGTATGGATAGTGGTGATGGGAATGTGGTGAGGACAGAGGAGATTGGTATGTCTAATTCCTTCGCCACTTTCCTTAACCAGCTTCCGCAGACTCCTTCATTACACCAACAGCAAACAATGCTTGGTTCTGTTGGGGATGGGCTCCTTCGGCAACCATATCATCAGCTTCATGGAATGAACTGGTATTCATAA 1119 0.4647 METTHSSTTSQHPNLPPGFRFHPTDEELVIHYLKRKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNKTNVKPPGCDLGNKKNSLRLDDWVLCRIYQKNNTHRSPMDHDRDDTIDDMMGRIPPSINVGQMNMRLQLPKLSTTYAGALLENDHNLMEGIICHGGMNTCAITSPLANSISTSKSTEQIPLGPTLANTSNSLPPKRTLTSLYWNDHDHQDLAGDAGASGNKRVNSMDSGDGNVVRTEEIGMSNSFATFLNQLPQTPSLHQQQTMLGSVGDGLLRQPYHQLHGMNWYS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00649 372 MobiDBLite consensus disorder prediction 1 15 - -
Pte6g00649 372 MobiDBLite consensus disorder prediction 1 20 - -
Pte6g00649 372 PANTHER NAC TRANSCRIPTION FACTOR 56 15 194 - -
Pte6g00649 372 FunFam NAC transcription factor 56 24 181 - -
Pte6g00649 372 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Pte6g00649 372 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pte6g00649 372 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Pte6g00649 372 SUPERFAMILY NAC domain 6 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00649 Pte-Chr6 10662496 10664679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00649 19 372 NAC Transcription Factor Family AT3G15510 55.464 8.51e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte6g00649 NAM 6.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00649 - - qsa:O6P43_000935 537.339