Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00639 ATGGAGTTTCGTAGAGTTAGTTTATTATGCCTCTCTGTTGTTCTCTTGGCTCATTTTGTAAAACCATCACAAGCTTTGACAAAGAATGTGGCTGAAGATGGCCTTTGGGTCACAAACCGCACCGAGGATTACAATGACTGGGCTTCACGCTACAGGTTCCAAGTAAATGACTCTATTGTTTTCAAGTACAACAAGTCAGACTCAGTGGTGTTGGTGAAGGAGGATGATTACTACAACTGTAATACAGACAATCCGATCCAGAAGTTTGATGATGGTAACACTGAATTCAAGTTTAATCAGTCTGGGTATTTGTATTTCATCAGTGGAATTCAGGATAACTGTAAGAATCGGGAGAGAATGATTGTTTATGTTATGTCTCCTGTTCACCATCGCCGCCATCGTCCAACAAAACTTCCGGCCCAACCACCGGTGTCTCAGCCACCCATTTCATTGTCTCAATTGCCTTCACCGTCTCCGGAGATAGCCCCTCAACGAGCACCGTCACCGGTTTCTTTATCTCCATGGCGGGCACCTGGACCAGCATCCACACCATCTCCTATGACCAGCCCTACGCCAAGCCCTTCCCCTACAGCCTACCCGCCATCAACAGTAGCAGCGTCATCACCTTCACCCTTGTCTGAACCTCCACTAGCTAGTGCACCAATAGCAGTGAATGTTTCTTCGCCCACCATATCACCATCGCCTGATGCATACCCACCGTCAGTTGCACCAGTGCAGAAAGTACCACCGCCTCCTTCCCCTCAAGCAATTACACCAGCATCAACTCCGGCACCATCCATGCAAACTAATCCACCAACCGCATCACCAGAGCAATCTCCATCGCCTCAGGCTACTCCACCGTGGATGGCACCAGGGAAATCACCATCTCCTCAGACACTTCCACCATCAGTTGCGCCAGTGCCATCTCCTCAGACTCTCCAGCCACCAGAAGTACCGGCACCGTCTTCTCAAAGTCTTCCGCCTTCTGAAGTGCCAGCTCCATCTCCTGTGAACCTTCCTCCTACATATACTCCAGCTCCTCAAGCTTTTCCCCCATCAGAAGTTCCAATACCATCTCCTCTGACTCCGCCGTCGTCAGAAGCACCAGGACCTTCTCCTCAGACTCTGACGCCATCAGAAGCCCCGATATCATCTCTTCCGACTTCTCCACCTTCAGAAGGACCAGCACCATCTCCTCAGACTCTTCCACTATCACAAGCTCCAGTGCCTTCTCCTCTAACTCTTCCACCGTCAGAAGCGCCAGCTCCATCCTCTGAACAGACTCTTCCACCATCAGAAGCGCCATCTCCATTTCTTGATCATAGTGTTACACCATTAGCAGCACCTGTACCATCACCGTCAGAGACTCCATCATCATCACCATCACCAAGTCCATGGTCTTTGCCACCCATTCTTCCTCCTGCAGTAACTCCATCTCCAGCAAAATCTCCATTGTCATCTCCGCCCATAGCCTCAGAAATATCAGCTCAACCTTCACCTTCTCCTGAACCTTCTGATGATGTATTCTATGGTATGCCACCGGACCAGTCGTCTGCACGGGGTGCAACTCATAGAAGCATATGGGCAGTTTCAGTCACTCTCCTCTTGAGTGCAGCATTGCTCTAA 1626 0.4994 MEFRRVSLLCLSVVLLAHFVKPSQALTKNVAEDGLWVTNRTEDYNDWASRYRFQVNDSIVFKYNKSDSVVLVKEDDYYNCNTDNPIQKFDDGNTEFKFNQSGYLYFISGIQDNCKNRERMIVYVMSPVHHRRHRPTKLPAQPPVSQPPISLSQLPSPSPEIAPQRAPSPVSLSPWRAPGPASTPSPMTSPTPSPSPTAYPPSTVAASSPSPLSEPPLASAPIAVNVSSPTISPSPDAYPPSVAPVQKVPPPPSPQAITPASTPAPSMQTNPPTASPEQSPSPQATPPWMAPGKSPSPQTLPPSVAPVPSPQTLQPPEVPAPSSQSLPPSEVPAPSPVNLPPTYTPAPQAFPPSEVPIPSPLTPPSSEAPGPSPQTLTPSEAPISSLPTSPPSEGPAPSPQTLPLSQAPVPSPLTLPPSEAPAPSSEQTLPPSEAPSPFLDHSVTPLAAPVPSPSETPSSSPSPSPWSLPPILPPAVTPSPAKSPLSSPPIASEISAQPSPSPEPSDDVFYGMPPDQSSARGATHRSIWAVSVTLLLSAALL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00639 541 MobiDBLite consensus disorder prediction 179 199 - -
Pte6g00639 541 MobiDBLite consensus disorder prediction 132 524 - -
Pte6g00639 541 MobiDBLite consensus disorder prediction 450 485 - -
Pte6g00639 541 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Pte6g00639 541 Gene3D - 25 128 IPR008972 -
Pte6g00639 541 CDD OsENODL1_like 29 125 IPR041846 -
Pte6g00639 541 PRINTS Pistil-specific extensin-like signature 463 484 IPR003882 -
Pte6g00639 541 PRINTS Pistil-specific extensin-like signature 323 346 IPR003882 -
Pte6g00639 541 PRINTS Pistil-specific extensin-like signature 138 149 IPR003882 -
Pte6g00639 541 MobiDBLite consensus disorder prediction 486 502 - -
Pte6g00639 541 SUPERFAMILY Cupredoxins 25 125 IPR008972 -
Pte6g00639 541 PANTHER BLUE COPPER PROTEIN 29 194 IPR039391 GO:0009055
Pte6g00639 541 MobiDBLite consensus disorder prediction 233 371 - -
Pte6g00639 541 MobiDBLite consensus disorder prediction 384 419 - -
Pte6g00639 541 MobiDBLite consensus disorder prediction 140 164 - -
Pte6g00639 541 ProSiteProfiles Phytocyanin domain profile. 28 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00639 Pte-Chr6 10451843 10453896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00639 9 296 Phytocyanin Superfamily AT5G53870 36.860 1.13e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00639 - - qsa:O6P43_029115 210.305