Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00633 ATGGAAGATAGTAGAACGTCAGGTGAAGATAGTCCTCTTCTCCTGGATGTGCTGGAAGATAGTCCTCGCCACGGTGAAGCCATAATTATTGTCTGGATGCCAGTAAGAGTTCCATTCCTAAGAATTTCTTCAGCAAAAGGCAGTGGACGCATCATGGCTATGATGAGAGCTACAATGGTTCAAAAGATCGAAAGAATAATACACAGGGACATTGAAAGGCAAAGAAGGCACGAAATGTCTAGCCTCTATACTTCACTTAGAGCTCTTCTCCCTTATGAGTTCATCAAGGTGAAGTTCCACCCACTAATTTCATGGAAAGCGTTCATATCAGATCATGTGAATGAGACAGTGAACTACGTCAAGCACTTGCAGCAGAAAATCAAAGAACTAAATGGCAAGAGAGATGAACTGAAGAAAGAGTCCAACTTGAGACGTGAAGAGAACTTTAACTGCACTTCAAGTAGCTCATTTGCGATTCAAGAAATATGTGGGATCACTCATGGGTTTATAGAGAATGGTTTACCCCTTTCGAAAGTACTAGGAGTCTTGCTTGAACAAGGACTTGATGTTGTTAGCTGTGTTTCCGCAATAGTGAATGGCAGATCACTACATACTATCCAGAAAGTTAAATTACTTGCTTATTATTATGCATTTAACTAA 660 0.403 MEDSRTSGEDSPLLLDVLEDSPRHGEAIIIVWMPVRVPFLRISSAKGSGRIMAMMRATMVQKIERIIHRDIERQRRHEMSSLYTSLRALLPYEFIKVKFHPLISWKAFISDHVNETVNYVKHLQQKIKELNGKRDELKKESNLRREENFNCTSSSSFAIQEICGITHGFIENGLPLSKVLGVLLEQGLDVVSCVSAIVNGRSLHTIQKVKLLAYYYAFN* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00633 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 123 IPR011598 GO:0046983
Pte6g00633 219 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 207 - -
Pte6g00633 219 CDD bHLH_AtORG2_like 64 148 - -
Pte6g00633 219 Coils Coil 120 147 - -
Pte6g00633 219 Gene3D - 63 152 IPR036638 GO:0046983
Pte6g00633 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 142 IPR036638 GO:0046983
Pte6g00633 219 Pfam Helix-loop-helix DNA-binding domain 65 124 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00633 Pte-Chr6 10240278 10241580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00633 68 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 38.065 8.90e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte6g00633 HLH 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00633 - - qlo:115971807 139.428