Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00602 ATGCAGAAACTCAAAAGTGCTGTTGGTGCAATTCCAGTTTTATTTAATTTCTTTAACTCTCTCGTTCATCCATCCATTCACCACAGAAGGAAAGGGATCGCTAGCTATTATAGCAAAGACCTTTTATCTGATTCTGTGAATTCTGTTCATCATCAAATTAGAATGGCACAGTTACCACCAAAAGTACCTACCATGACTCAAAACTGGCCTACCTTTCCTAACCAGAAAATGCCAGCAAACTTCACTTCCACCAATTCTCAAGCATCTCCTCGACAACCCTTTTGGGCAGACGAATTCCTGGAATACTCGTCGGCACGGCGCGGGACACACAGGCGGTCAGCCAGTGACTCCATAGCATTCATGGAGACGACTGCTACATTCTATGAAGAATGCGGCCGGAACTTGGGCACGATGAATCCTGCAACCAATGGATTTGATCGTTTGGACGACGAACAACTCATGTCAATGTTCAATGACAACGTAGATGTTTCCTTGCCGCTGCCGGCTTCAACATCCAATCCATCCACGCCATCCGACCAAAACAGCAACAACAATGAAAAGCCAATCGTATTAGATCCACAAATGGAGCTGCAGCGAAAGAATGAACCTGGAGAGGTTGATAGCTCATGCAAACCTGAACCACCAGCTCTGACAGCAACCACTGCCAACCCCAGCAACGATCATATTATCGACCCCAAAAGAGTTAAGAGAATACTGGCTAACAGGCAATCGGCTCAAAGGTCGAGGGTGAGGAAACTCCAATACATCTCTGAACTTGAACGGAGTGTAACATCATTGCAGACGGAGGTATCAGCTTTATCACCAAGGGTGGCATTCTTAGATCACCAACGTTTGATTCTCAATGTAGACAATAGTGCCTTGAAGCAAAGGATTGCTGCTTTGGCTCAGGATAAGATCTTCAAGGATGCTCACCAAGAGGCATTAAAGAAAGAAATAGAGAGATTAAGGCAAATATATCATCAGCAGAACCTAAAGAAGATTGGAAACACAGACGCCAACAACGTACATTCTTCTAATCCATCGTCAGGTGCAGAATCAGCAGTACACCAAGAACAGCAACAGCCAATCTCAGATCCCACTGTTCGTACGGATAAGTGTTCTTGA 1125 0.448 MQKLKSAVGAIPVLFNFFNSLVHPSIHHRRKGIASYYSKDLLSDSVNSVHHQIRMAQLPPKVPTMTQNWPTFPNQKMPANFTSTNSQASPRQPFWADEFLEYSSARRGTHRRSASDSIAFMETTATFYEECGRNLGTMNPATNGFDRLDDEQLMSMFNDNVDVSLPLPASTSNPSTPSDQNSNNNEKPIVLDPQMELQRKNEPGEVDSSCKPEPPALTATTANPSNDHIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLKKIGNTDANNVHSSNPSSGAESAVHQEQQQPISDPTVRTDKCS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00602 374 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Pte6g00602 374 MobiDBLite consensus disorder prediction 164 189 - -
Pte6g00602 374 MobiDBLite consensus disorder prediction 333 368 - -
Pte6g00602 374 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Pte6g00602 374 MobiDBLite consensus disorder prediction 164 228 - -
Pte6g00602 374 SUPERFAMILY Leucine zipper domain 233 287 IPR046347 GO:0003700|GO:0006355
Pte6g00602 374 Gene3D - 232 284 - -
Pte6g00602 374 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 283 IPR004827 GO:0003700|GO:0006355
Pte6g00602 374 Pfam bZIP transcription factor 233 278 IPR004827 GO:0003700|GO:0006355
Pte6g00602 374 CDD bZIP_plant_RF2 234 284 IPR044759 GO:0003700|GO:0006355
Pte6g00602 374 Coils Coil 312 332 - -
Pte6g00602 374 MobiDBLite consensus disorder prediction 333 374 - -
Pte6g00602 374 FunFam Basic leucine zipper 61 232 305 - -
Pte6g00602 374 PANTHER BASIC LEUCINE ZIPPER 34 55 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00602 Pte-Chr6 9019667 9022707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00602 55 310 bZIP Transcription Factor Family AT3G58120 55.631 3.47e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g00602 bZIP_1 1.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00602 - - qsa:O6P43_001014 400.979