Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00590 ATGTCTAACGTCTTTATCGTTTGTGTACAACATATTGTGTTTCCTGGCAGAACCGATCCGCATTTACACGACATGCCGATTGTTTATGCTAGTTTTGGATTTTTGAAATTAACAGGTTATGCAATGAACGAAGTGCTGGGGCACAATTGTAGATTTTTAAGCGGGCATAATACAGATACCTTGACATTACATCAGATAAGGGAAAGCATTAAATCTGAACAAGCATGCACAGTACGTATCTTAAATTACAGGAAAGACAAGAGCACATTTTGGAACCTGCTCCACATATCGCCTGTTCGTAATGCATCTGGAAAGGTGGCATTCTTTGTTGGTGTTCAAATAGAAGAAGATAATGAGAAGCAGGAGAGACATGGGTTGATCCCTGAGATGAGGCAACGAAGTGTTGTTGGTGCAGTCAAGGTTGCAGTGAGGAGTTTATCTATAGCTGGTGGTGCTTCAAAGTCAAGTGTTGAATAA 477 0.4046 MSNVFIVCVQHIVFPGRTDPHLHDMPIVYASFGFLKLTGYAMNEVLGHNCRFLSGHNTDTLTLHQIRESIKSEQACTVRILNYRKDKSTFWNLLHISPVRNASGKVAFFVGVQIEEDNEKQERHGLIPEMRQRSVVGAVKVAVRSLSIAGGASKSSVE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00590 158 ProSiteProfiles PAC domain profile. 74 128 IPR000700 -
Pte6g00590 158 PANTHER PROTEIN TWIN LOV 1 18 145 - -
Pte6g00590 158 Pfam PAS domain 24 113 IPR000014 -
Pte6g00590 158 NCBIfam PAS domain S-box protein 27 115 IPR000014 -
Pte6g00590 158 CDD PAS 23 112 IPR000014 -
Pte6g00590 158 SMART pac_2 77 119 IPR001610 -
Pte6g00590 158 SUPERFAMILY PYP-like sensor domain (PAS domain) 20 113 IPR035965 -
Pte6g00590 158 Gene3D PAS domain 17 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00590 Pte-Chr6 8804800 8807477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00590 18 149 AGC Kinase Gene Family AT5G58140 41.007 3.96e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00590 - - qsu:112039411 218.394