Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00589 ATGGAATCGCAATTGGGTTTGATAGACCAATCGTTTAATCAACGTTATTCGTACTACGTTCGAGAAGCTCTCGACGAATTGCCTGAGAGTTTCACAATAACGGACCCCTGTTTACCTGGCCACCCAATTGTCTTTGTGAGTAGTGGTTTTTTGAAAATGTCAGGGTATTCAATGGACGAGGTAATTGGTAAGAACGGAAGGTTTTTCCAAGGACCCCGAACTTGCAGAAGGTCGGTAATGGAGATTAGGGAGGCCATAAGAGAAGAAAGGATGGTACAGATCAACTTGCTGAACTATCGCAAGGATGGGACACCCTTTTGGATGTTTTTTCACATGTGTCCTGTTTTTAGCAAAGACGACGGTAGGGTCACTCACTTTGTGGCAGTTCAGATACCTATTTTGAGAAAACTAAGGCGGTCGGGGACTGCTTCTAGAAGAAATGGCGTTCATTTGTGCGAAGATGGATCTAGCAAGCACGATTTTGTGTTTGGTTCTTGTCGGAGAGAAGTGTGCTCTGATTCTGTGTTGGAACTGAGTCGTAGTTTTGAGCTGGATTCTGATATAGGAGAAGCAGAGAATGAAGTGCCGTGTGAGGCAAGTGATGGGGAAAAGAAAAGAGCTACAACTACCATGAACAACATTTTTTCTGTTCTCATCCACTATAGCGAGGTGACTGGTAGATTAGTGAGCAGTCAAAGATCTGGCATTCCTAAAACGACTCTTCTTTGTTCATCCTTGAATATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTGTGA 780 0.4295 MESQLGLIDQSFNQRYSYYVREALDELPESFTITDPCLPGHPIVFVSSGFLKMSGYSMDEVIGKNGRFFQGPRTCRRSVMEIREAIREERMVQINLLNYRKDGTPFWMFFHMCPVFSKDDGRVTHFVAVQIPILRKLRRSGTASRRNGVHLCEDGSSKHDFVFGSCRREVCSDSVLELSRSFELDSDIGEAENEVPCEASDGEKKRATTTMNNIFSVLIHYSEVTGRLVSSQRSGIPKTTLLCSSLNISLGRIKQSFVL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00589 259 Gene3D PAS domain 30 154 - -
Pte6g00589 259 SMART pac_2 93 136 IPR001610 -
Pte6g00589 259 SUPERFAMILY PYP-like sensor domain (PAS domain) 28 130 IPR035965 -
Pte6g00589 259 PANTHER PROTEIN TWIN LOV 1 4 259 - -
Pte6g00589 259 FunFam Protein TWIN LOV 1 isoform D 30 220 - -
Pte6g00589 259 Pfam PAS domain 29 130 IPR000014 -
Pte6g00589 259 NCBIfam PAS domain S-box protein 43 129 IPR000014 -
Pte6g00589 259 ProSiteProfiles PAS repeat profile. 16 65 IPR000014 -
Pte6g00589 259 CDD PAS 43 133 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00589 Pte-Chr6 8803729 8804746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00589 15 182 AGC Kinase Gene Family AT5G58140 33.929 9.75e-27 107