Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00582 ATGTGGCTTTTGATTTCAACCTTTAAGGTTTTCTCTGCTTGCGCCTTCTGTTTTCTGGTTCTCAATGGCTTCTTGGGGTTTGCATCCAACGGTCAACTTGTGCCAGAAGATGAAGTTAGAGTTCTTCAAACAATATCAAACAAGCTAGAGAAGTTGAACTGGAAGGTCACCCAACGTTCCTGTATTGATGTTAAGGATGGAGTTGTTAACAACACAGTCACAGTCCAAGACAAGATTTTGACCAATGTCACCTGCAATTGCACCTTTGAAAGTGGCTCTGTCTGCCATGTCACCCACATTCAACTGAAGGGTCTCAACTTAACTGGAGTTTTCCCAGATGAATTTGGAAACCTCACTCATCTCCAGGAAATTGAGCTTAGCCGAAATTATATCAATGGTTCAATTCCCACAAGTCTTGCACGCCTTCCTCTTGTTAATCTTACCCTTCTGGGAAATCGACTTAGCGGCACAATCCCTAAGGAAATTGGTAATATCAGTAGTCTGCAACAGTTGGTTTTGGAAGATAATCAGTTTGGAGGGGTTCTTCCTTCAACCCTAGGAAATTTGAAACAATTAGAAAGATTACTTCTTTCTGCAAACAATTTCACAGGTGTAATACCTGAATCATATGGCAACCTAACAAACCTAGTTGACTTTAGGATAGATGGAAGCACCCTATCAGGCAAAATACCCGATTTTATCGGAAATTGGACAAAACTTCAAAGATTAGATATCCAGGGTACTAACATGGAAGGGCCAATTCCTTCTACAATTGCTCTGTTGAAAAATTTGAAGGAACTGAGAATATCTGATTTGCATGGACCAACCATAAGTTTTCCTAACCTCACGGATGTGAAAATGATGGAACGATTGGCATTGCGAAATTGTTTGATTAGTGGTCCAATTCCTAAATACATTGGAGAAATGCAAAAACTAAAATCTCTAGACCTGAGCTTCAACAGGTTGACTGGTGCAATTCCAGATTCAATTCAGGGCCTGCAAAATCTAGATTTCATGTTTTTGACAAACAACGCTCTAAGTGGTCCAATTCCAGGATGGGTGCAAAGCAATGATAATAAATTAGATCTATCTTTCAACAACTTCTCAGAGTCATCGGTGACAAATTGCCAGCTTGCTGATGTGAACTTAGCTTCTAGTCAGTCATCTTCTCAGAGCAATTTAGTTGTTTGGTGCATGAAGAAGGATCTCCCTTGTGCTAGTAAACCCCATTATCACTCTTTGTTCATCAACTGTGGAGGGCCTCGCATAGAGTTCGAGGAAAACGAATACGAAGCTGACCAAAACTTAGAGGGAATTTCGAACTTTGAACATTCTCAGAGTTGGGGTTATAGTAGCACAGGCGTTTACTTAGGAGATGACAAGGCCCCGCATGTAGCAACAAATTCATTTTCTTTGAACGTGAGCGGTCCAGAGTATTTCCAGACAGCTCGCCTCTCAGCTGTATCACTCAAGTATTTTGGCCTTTGCATGCTGAAAGGCAATTACAAAGTGAAACTTCATTTTGCTGAAATAATGTACAGTGATGGCAAAACATTTAGCAGCCTTGGCAAGCGAATGTTTGATGTTTCAATTCAGGGGATTGTGTATCTTAAAGATTTTAATATAATGGAGCAAGCTGGCGGTGTCGGTAAAGGCATCACTAAGGAATTTAATGTTGACGTCAATGGTAGTACTTTAGAGATTCATCTGTACTGGGCTGGAAAAGGAACAACAGCCATTCCTGACAGGGGAGTTTATGGACCTTTAATATCTGCCATAACAGTCACTCCAAATTTCAAAGTTCCTTCACAAGGGTTGTCTGCCGGAGCGATTGCTGGAATTGTTGTTTGTTCTTCTGTCTTGATTGTCCTGATACTGGTTTCACTTTGGAAGAAGGGTCTCATTGGAGGAAAAGATCCTGAAGATAAAGAACTCCACGGGCTAGATCTGCAAACTGGATATTTTACTCTAAGACAAATCAAAGCTGCCACTGGTAATTTCAACCCTGCCAACAAGATTGGTGAAGGAGGATTCGGGCCGGTGTACAAGGGTGTACTGTCAGATGGTGTTCTGATAGCTGTTAAGCAGCTTTCTTCCAAATCAAAGCAAGGGAACCGCGAATTTGTCAATGAGATAGGCATGATTTCTGCTTTACAGCACCCAAATCTTGTTAAACTTCATGGCTGTTGCATCGAAGGACACCAGCTGTTGCTAATATATGAATACATGGAAAACAACTCTCTGGCTCGTTCCCTCTTCGGCCATGAAGATCAGCGGCTACAATTGGACTGGTCCACAAGGAAGAAAATATGTCTGGGTATAGCAAGAGGACTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTTCATAGAGACATTAAGGCAACAAATGTCTTACTGGATAAGGATCTCAATGCTAAGATATCTGATTTTGGTTTAGCTAAGCTTGATGAAGAAGATAACACCCATATCAGCACACGTATAGCTGGAACAGTAGGTTATATGGCTCCAGAATATGCAATGAGGGGTTACTTGACTGACAAGGCGGATGTATACAGCTTTGGAATTGTTACTCTGGAGATTGTGAGTGGGAAGAGCAATACAAATTACAGGCCGAAGGAGGAATTTGTTTATCTTCTTGATTGGGCTTATGTCCTACAAGAGCAAGGAAACCTTTTGGAATTGGTCGATCCAAGTCTAGGATCCAACTACTCTGAAGAAGAGGCCAGGAGAATGCTGACCTTGGCGTTGGTGTGCACTAATCCATCTCCTACTCTAAGACCATCCATGTCTTCAGTAGTGAGCATGATTGAAGGCAAAATTGCAATCCAAGCCCCAATAGTCAGGCGATCTGATACAAATCCAGACGGAAGATTCAAAGCCTTTGAGTTGCTATCATCACATGATAGCTATACACGCATTTCCACTGCATCCTCACAAGAAAGTCAAGTGCAAAGAACCATGACAATAGATGGACCATGGATTGACTCCTCCATTTCTGTGCCTAGTACACAGGACCATTCTTCATCCAGGACGCCTATTCAGAAATCAGAATCGTTGATATGA 3069 0.4158 MWLLISTFKVFSACAFCFLVLNGFLGFASNGQLVPEDEVRVLQTISNKLEKLNWKVTQRSCIDVKDGVVNNTVTVQDKILTNVTCNCTFESGSVCHVTHIQLKGLNLTGVFPDEFGNLTHLQEIELSRNYINGSIPTSLARLPLVNLTLLGNRLSGTIPKEIGNISSLQQLVLEDNQFGGVLPSTLGNLKQLERLLLSANNFTGVIPESYGNLTNLVDFRIDGSTLSGKIPDFIGNWTKLQRLDIQGTNMEGPIPSTIALLKNLKELRISDLHGPTISFPNLTDVKMMERLALRNCLISGPIPKYIGEMQKLKSLDLSFNRLTGAIPDSIQGLQNLDFMFLTNNALSGPIPGWVQSNDNKLDLSFNNFSESSVTNCQLADVNLASSQSSSQSNLVVWCMKKDLPCASKPHYHSLFINCGGPRIEFEENEYEADQNLEGISNFEHSQSWGYSSTGVYLGDDKAPHVATNSFSLNVSGPEYFQTARLSAVSLKYFGLCMLKGNYKVKLHFAEIMYSDGKTFSSLGKRMFDVSIQGIVYLKDFNIMEQAGGVGKGITKEFNVDVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKVPSQGLSAGAIAGIVVCSSVLIVLILVSLWKKGLIGGKDPEDKELHGLDLQTGYFTLRQIKAATGNFNPANKIGEGGFGPVYKGVLSDGVLIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGHQLLLIYEYMENNSLARSLFGHEDQRLQLDWSTRKKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEDNTHISTRIAGTVGYMAPEYAMRGYLTDKADVYSFGIVTLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSEEEARRMLTLALVCTNPSPTLRPSMSSVVSMIEGKIAIQAPIVRRSDTNPDGRFKAFELLSSHDSYTRISTASSQESQVQRTMTIDGPWIDSSISVPSTQDHSSSRTPIQKSESLI* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00582 1022 Pfam Protein tyrosine and serine/threonine kinase 671 936 IPR001245 GO:0004672|GO:0006468
Pte6g00582 1022 Gene3D Ribonuclease Inhibitor 162 275 IPR032675 -
Pte6g00582 1022 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 742 - -
Pte6g00582 1022 CDD STKc_IRAK 673 940 - -
Pte6g00582 1022 SUPERFAMILY Protein kinase-like (PK-like) 650 946 IPR011009 -
Pte6g00582 1022 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 205 - -
Pte6g00582 1022 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00582 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pte6g00582 1022 SMART LRR_typ_2 309 332 IPR003591 -
Pte6g00582 1022 SMART LRR_typ_2 165 188 IPR003591 -
Pte6g00582 1022 SMART LRR_typ_2 189 212 IPR003591 -
Pte6g00582 1022 SMART LRR_typ_2 118 142 IPR003591 -
Pte6g00582 1022 Gene3D - 412 598 - -
Pte6g00582 1022 Gene3D Ribonuclease Inhibitor 42 161 IPR032675 -
Pte6g00582 1022 Gene3D Transferase(Phosphotransferase) domain 1 743 955 - -
Pte6g00582 1022 Gene3D Ribonuclease Inhibitor 276 402 IPR032675 -
Pte6g00582 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 206 273 - -
Pte6g00582 1022 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 976 - -
Pte6g00582 1022 Pfam Leucine rich repeat 289 346 IPR001611 GO:0005515
Pte6g00582 1022 Pfam Malectin domain 414 593 IPR021720 -
Pte6g00582 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 598 - -
Pte6g00582 1022 MobiDBLite consensus disorder prediction 994 1022 - -
Pte6g00582 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Pte6g00582 1022 SMART serkin_6 667 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00582 1022 SUPERFAMILY L domain-like 79 373 - -
Pte6g00582 1022 Gene3D Phosphorylase Kinase; domain 1 638 742 - -
Pte6g00582 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 280 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00582 Pte-Chr6 8385407 8393791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00582 27 1004 Receptor kinase-like Gene Family AT1G53440 62.929 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte6g00582 PK_Tyr_Ser-Thr 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00582 - - qsa:O6P43_001071 1478