Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00562 ATGGATGTGGGAAATAATGGATTCTGCGTCTTTCTGCAGGGAGTGACCAAAGGCCTAGTTGCAGAAAAAATCTTCTCATCAATGTCTGAGAAGGGGACACAGGCAGACTTTGTCCTGTGCGTTGGTGATGATCGATCTGATGAAGATATGTTTGAAATAATAGGCAGTGCTCTATCCAGAAATTTGCTTGCTGGCAATGCTTCTGTATATGGCTGTACTGTAGGCCAAAAGCCGAGCAAAGCTAAGTATTACCTGGATGACACTGCTGAAGTAAGAAGCATGCTAGGAGCTATGGCTGAGGCCTCTTATTCTTCACTTCCCAGAAAAGAATTTGGGAGTTGA 342 0.4415 MDVGNNGFCVFLQGVTKGLVAEKIFSSMSEKGTQADFVLCVGDDRSDEDMFEIIGSALSRNLLAGNASVYGCTVGQKPSKAKYYLDDTAEVRSMLGAMAEASYSSLPRKEFGS* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00562 113 Gene3D - 3 109 IPR023214 -
Pte6g00562 113 Pfam Trehalose-phosphatase 13 88 IPR003337 GO:0003824|GO:0005992
Pte6g00562 113 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 14 100 IPR001830 GO:0003824|GO:0005992
Pte6g00562 113 SUPERFAMILY HAD-like 9 98 IPR036412 -
Pte6g00562 113 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00562 Pte-Chr6 7277002 7277343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00562 13 105 Trehalose Biosynthesis Gene Families AT1G06410 70.968 5.36e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00562 K16055 - qsa:O6P43_000837 151.369