LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte6g00561	ATGATGTCAAGGTCGTATACTAATCTTCTAGATTTGGCTTCTGGTAATTTCCCGGCAATTGGAAGTGGTTTTAAGGAACGGAAGCGGCTTCCAAGGGTCATGACTGTCCCAGGAAACATTGCAGAGCTTGATGACGATCAGGCGCATAGTGTTTCTTCTGAAAATCCGTCAACAACTACTACAGATCGGATGATCATCGTAGCTAACCAGCTACCACTAAAAGCAAAAAAGAGAGATGATAATAAAGGATGGGATTTTAGTTGGAATGAGGATTCTTTGCTTTTACAACTTAAGGATGGGCTTCCAGAAGAAATGGAGGTCATTTATGTAGGTTCATTGCGAGTTGATGTTGATCCAAACGAACAAGATGATGTTTCCCAGGTTTTATTGGATAGATTTAAATGTGTTCCTACATTTCTGCCCCCCGATGTTTTGGAAAAATTCTATGATGGCTTCTGTAAGAGGCATCTGTGGCCACTTTTCCATTACATGCTACCCTTTTCAGCTGATAAAGCACACCGTTTTGATCGGTCTTTGTGGGAAGCTTATGTGTCGGCGAATAAATTATTTTTCCAGAAAGTTGTTGAAGTAATAAATCCTGAAGATGACTATATATGGATTCACGATTATCATTTGATGGTGCTGCCTACCTTTATAAGAAGACGATTTAACAGAGTAAAAATGGGCTTTTTCCTGCATAGCCCTTTTCCTTCTTCGGAGATATATAGGACTCTTCCTGTAAGGGAGGAGATACTAAAGGCTTTACTTAACTCTGATATCATTGGCTTTCACACCTTTGACTATGCTCGCCATTTCCTTTCTTGCTGCAGTCGCATGTTGGGTTTGGAGTATCAGTCTAAACGGGGCTACCTGGGATTAGAATATTATGGGAGAACTATCAGCATCAAGATCATGCCAGTTGGGATTCACATGGGTAGGATTGAATCTGTGATGAAAATGGCAGATGAGGAGAGTAAACTGAGGGAGCTCAGACAGCAATTTGAAGCAAAAACAGTGTTACTTGGTGTTGATGATATGGACATTTTTAAAGGTATTAATTTGAAACTTTTGGCAATGGAACAGATGCTCAGTCAGCATCCTGAGTGGCAGGGTAGAGCCGTACTGGTTCAGATAGTAAACCCTCCTAGGGATAAAGGAACACATTTAGAAAACGTAAGGACTGAAATAAATGAAATATGCAGTAGGATAAACAGAATATATGGCCGGCCTGGCTACGATCCAATAGTCTTTATTGACAGATCAGTTTCAATTGCTGAAAAAGTTGCCTACTACAGCATTGCTGAGTGTGTTGTTGTTACAGCTGTCAGGGATGGGATGAACTTAACTCCTTATGAATATATCGCCTGCAGGCAGGGAACATCTGTTACTAGTCCCAAAAAGAGCATGCTTGTAATATCAGAATTTATTGGATGTTCTCCATCACTTAGTGGAGCTATCCGGGTGAATCCATGGAATGTTGAATCAACTGCAGAAGCACTGAACGAGTCTATATCAATGGCTGATTCAGAAAAGCAGCTGCGGCATGAAAAGCATTACCGCTATATCAGCACTCATGATGTAGCATTTTGGTCCCGCAGTTTCTTGCAGGATATGGAGCGGGCTTGCACAGACCTTCTAAGGAAACGGTGCTGGGGAATTGGTTTCAGCTTTGGGTTCAGAGTCGTGGCCCTTGACCCTAACTTTAGAAAGCTGTCAATTGATGCTATTGTATCATCTTATAAAAGGGCAAAGAATAGAGCTATTTTGTTAGATTATGATGGCACTGTAATACCGCAGAACTCCATTAACAAGTCACCGAGTGAGGAGGTTATCTCTATTCTGGACACTCTTTGTGCAGACCCGAAAAATGTAGTCTTCATTGTGAGTGGAAGAGGGAGGGGAAGCTTGAGTAATTGGTTTTCACCCTGCAAGAAGCTTGGTATTGCAGCGGAACACGGATACTTCATAAGATGGGCACAAAATGAAGAATGGGAAACCTGTGGTAAGAGCTCCGACTTTGGATGGATGCAGATTGTAGAACCTGTGATGAAATTGTATACAGAGTCCACTGATGGTTCTTGCGTCGAAACTAAGGAAAGTGCTTTGGTTTGGCAGTACCGGGATGCAGATCAAGGGTTTGGATCAGCTCAGGCTAAAGAATTGTTAGATCATCTGGAGAGTGTTCTGGCAAATGAACCAGTCGCCGTTAAAAGTGGCCAGTTTATCGTTGAAGTAAAACCGCAGGTATGGCTTCCTTTTTTATATCTTAAATATAATTCTACTTTATGGCATCTAGCGAGGATAGCACAATTCGCAAACTTTTTTTGA	2328	0.4158	MMSRSYTNLLDLASGNFPAIGSGFKERKRLPRVMTVPGNIAELDDDQAHSVSSENPSTTTTDRMIIVANQLPLKAKKRDDNKGWDFSWNEDSLLLQLKDGLPEEMEVIYVGSLRVDVDPNEQDDVSQVLLDRFKCVPTFLPPDVLEKFYDGFCKRHLWPLFHYMLPFSADKAHRFDRSLWEAYVSANKLFFQKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMKMADEESKLRELRQQFEAKTVLLGVDDMDIFKGINLKLLAMEQMLSQHPEWQGRAVLVQIVNPPRDKGTHLENVRTEINEICSRINRIYGRPGYDPIVFIDRSVSIAEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQGTSVTSPKKSMLVISEFIGCSPSLSGAIRVNPWNVESTAEALNESISMADSEKQLRHEKHYRYISTHDVAFWSRSFLQDMERACTDLLRKRCWGIGFSFGFRVVALDPNFRKLSIDAIVSSYKRAKNRAILLDYDGTVIPQNSINKSPSEEVISILDTLCADPKNVVFIVSGRGRGSLSNWFSPCKKLGIAAEHGYFIRWAQNEEWETCGKSSDFGWMQIVEPVMKLYTESTDGSCVETKESALVWQYRDADQGFGSAQAKELLDHLESVLANEPVAVKSGQFIVEVKPQVWLPFLYLKYNSTLWHLARIAQFANFF*	776

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte6g00561	775	FunFam	Alpha,alpha-trehalose-phosphate synthase	317	523	-	-
	Pte6g00561	775	FunFam	Trehalose-6-phosphate synthase 2	669	748	-	-
	Pte6g00561	775	NCBIfam	trehalose-phosphatase	583	750	IPR003337	GO:0003824\|GO:0005992
	Pte6g00561	775	Gene3D	Glycogen Phosphorylase B;	55	316	-	-
	Pte6g00561	775	SUPERFAMILY	HAD-like	586	748	IPR036412	-
	Pte6g00561	775	Gene3D	Glycogen Phosphorylase B;	317	523	-	-
	Pte6g00561	775	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	31	749	IPR001830	GO:0003824\|GO:0005992
	Pte6g00561	775	Pfam	Trehalose-phosphatase	589	749	IPR003337	GO:0003824\|GO:0005992
	Pte6g00561	775	CDD	GT20_TPS	63	539	IPR001830	GO:0003824\|GO:0005992
	Pte6g00561	775	FunFam	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6	585	702	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte6g00561	Pte-Chr6	7272963	7276425	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte6g00561	1	748	Trehalose Biosynthesis Gene Families	AT1G06410	78.088	0.0	1248

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte6g00561	K16055		-	qsa:O6P43_028934	1359.74

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