Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00559 ATGGAACAACGTAGAATTTGCACCATTAATCCTGCTGCTTCTGACTCAGAAGAAACTGAAACCATGTCAGAAACAGGACCGGACTCTCCTTCATGTGATGACATAAAAGTTGAAGCACCGTCACCCAAGAAAAGGAAAACTATACAGAAGAAGGTGGTGGCAGTACCGATCGGTGACGTGGAAGGATCAAAGAATAAAGCGGAAACATATCCGCCGTCCGATTCATGGGCCTGGAGGAAATACGGCCAGAAGCCCATTAAAGGCTCTCCTTATCCCCGGGGATACTATCGATGTAGCAGTGCAAAAGGCTGCCCCGCAAGAAAACAAGTGGAGAGAAGCCAAGCGGACCCCACAATGCTTATAGTAACCTACGCCTGCGAACACAACCACCCTTCTCCCACAGCCAAATCCAGTGCCTCCACGTCAGCATCCACCATGACCCACTCCGCCAACGCAAATGAGGGTCCCTGCTCATCAGGTGGTGCGACGGAAGCAGCCACCAAGTCATCCAGCCCGAGGGTTGAATCGGAAGATGCTTTGGGTATCAGAGATCGACCCAAATTGGAATTGCCAAGTTCAGATTCGGCGACAGTTCTGCTCGGCGACGAATTTAGCTGGTTTGATGATGTGTGTTCCACTAGTGTATTTGAGAGCCAGATCTGCTCAGAGGAAGATGACGTGGCATGGATGACGAAGGAGGAGGATGATTCTCTGTTCGCCGACCTCGGCGAGTTGCCGGAGTGCTCGGCAGTTTTCCGACGTAGTCGTTTTAGTTTAAGCTCGAGTGTGATTCCTTGCTGTAGTAGCACAGGCTAA 816 0.5086 MEQRRICTINPAASDSEETETMSETGPDSPSCDDIKVEAPSPKKRKTIQKKVVAVPIGDVEGSKNKAETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSAKGCPARKQVERSQADPTMLIVTYACEHNHPSPTAKSSASTSASTMTHSANANEGPCSSGGATEAATKSSSPRVESEDALGIRDRPKLELPSSDSATVLLGDEFSWFDDVCSTSVFESQICSEEDDVAWMTKEEDDSLFADLGELPECSAVFRRSRFSLSSSVIPCCSSTG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00559 271 MobiDBLite consensus disorder prediction 130 187 - -
Pte6g00559 271 MobiDBLite consensus disorder prediction 9 28 - -
Pte6g00559 271 MobiDBLite consensus disorder prediction 1 49 - -
Pte6g00559 271 Gene3D WRKY domain 59 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g00559 271 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g00559 271 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g00559 271 FunFam WRKY transcription factor 65 58 133 - -
Pte6g00559 271 SUPERFAMILY WRKY DNA-binding domain 68 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g00559 271 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 250 IPR044810 GO:0003700
Pte6g00559 271 ProSiteProfiles WRKY domain profile. 67 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g00559 271 MobiDBLite consensus disorder prediction 62 83 - -
Pte6g00559 271 MobiDBLite consensus disorder prediction 130 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00559 Pte-Chr6 7253711 7256395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00559 14 254 WRKY Transcription Factor Family AT3G58710 50.787 9.13e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g00559 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00559 - - qsa:O6P43_028932 270.781