Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00545 ATGGCTCAATTGCCCCCTAAGATCCCAAATGATCATACCATACCCAGTTGGCCTGGTTTTCCACAGCAGAAGATACCTTCAATTGCAAGTTTCTCACCGGATAATGAGACCACCAACAACAACCAGAACCCTTCTTGGGTTGATGAATTTCTCGACTTCTCGGCCGCACGGCGGAGCACTCACCGGCGGTCCATAAGTGATTCTATTGCCTTCCTTGAAGCACCAATGTTGGACCAAAGTCATGGTGGCTCGGCCATGGCACAAGCGCCTGGGAATGACAATGAGTTTGAAAGATACAACGATGAGCAATTCATGTCAATGTTCAACGATGAGATGCATGGAGGAGTCACGGGAGGCCAGAATGCGTCATCTTCAAACCCTTCAAGTCCATCTGACCACAATAGCATTAACGGAGAGAAAGAGTCTCAATGTGATAAGGATCATCTGAACCAAAGTCACCAAGAGAAACAACTGCAGCAGTTGAAAAATGAACCTGAGGAGGATGAAAGCGAATGTCACCAAGAGGGGCAGGCTGCCTTTAATAATAACTCTGCAACTGCTTTCAATGACAGGGTGACCGATCCCAAGAGGGTCAAGAGAATACTGGCAAATAGACAATCTGCCCAGAGATCGAGAGTGAGGAAGCTGCAATATATTTCAGAGCTAGAACGAAGTGTAACTTCATTACAGGCTGAAGTTTCAGTGCTATCACCAAGAGTTGCATTCTTAGATCACCAAAGATTGCTTCTAAATGTTGACAACAGTGCCCTTAAGCAAAGAATCGCCGCCCTTGCACAAGACAAAATTTTTAAAGATGCTCATCAAGAAGCACTGAAGACGGAGATCGAGAGACTGAGGAAAATCTTTCACCAGCAGAACATCAAGAAGATGGAAAGCACGTCGCCATTGCCATCAGCAACTGCACCTTCACATGAAGCTAAAGCAGAAATGGAGCAGCTCCTCAATGCTTGA 972 0.4588 MAQLPPKIPNDHTIPSWPGFPQQKIPSIASFSPDNETTNNNQNPSWVDEFLDFSAARRSTHRRSISDSIAFLEAPMLDQSHGGSAMAQAPGNDNEFERYNDEQFMSMFNDEMHGGVTGGQNASSSNPSSPSDHNSINGEKESQCDKDHLNQSHQEKQLQQLKNEPEEDESECHQEGQAAFNNNSATAFNDRVTDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKTEIERLRKIFHQQNIKKMESTSPLPSATAPSHEAKAEMEQLLNA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00545 323 MobiDBLite consensus disorder prediction 138 174 - -
Pte6g00545 323 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Pte6g00545 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Pte6g00545 323 MobiDBLite consensus disorder prediction 294 323 - -
Pte6g00545 323 FunFam Basic leucine zipper 61 195 268 - -
Pte6g00545 323 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Pte6g00545 323 MobiDBLite consensus disorder prediction 1 46 - -
Pte6g00545 323 MobiDBLite consensus disorder prediction 175 190 - -
Pte6g00545 323 Pfam bZIP transcription factor 196 240 IPR004827 GO:0003700|GO:0006355
Pte6g00545 323 MobiDBLite consensus disorder prediction 110 192 - -
Pte6g00545 323 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Pte6g00545 323 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Pte6g00545 323 MobiDBLite consensus disorder prediction 116 137 - -
Pte6g00545 323 MobiDBLite consensus disorder prediction 23 46 - -
Pte6g00545 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
Pte6g00545 323 Gene3D - 195 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00545 Pte-Chr6 6952051 6954532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00545 1 273 bZIP Transcription Factor Family AT3G58120 58.446 1.79e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g00545 bZIP_2 4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00545 - - qsa:O6P43_000796 412.149