Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00534 ATGGGAAGTGCTTGCTTCGTCTCTCCCATATTCGTCTGCGTTTTGTTCTCTTCCATCGCTTCCTGCTTCTCAAGCCCTCATCTCCTCGGAGTTCATCCTCTAGACGAGAAGTACTATGCACGTGAGGTGATCAACTGCAAGGACGGATCGAAGTCTTTCACAAGAAACCGTATTAATGACAATTTCTGTGACTGCGTCGATGGCACTGATGAACCTGGAACTTCTGCTTGTCCAGCTGGAAAGTTCTACTGTAAAAATGTAGGAAGCACTCCTAAGTTTATTTATTCTTCTCAGGTTAATGATCGCTTCTGTGATTGTTGCGATGGGAGTGATGAGTATGATAGCAATTTCCATTGTCCCAACACATGTGTGATGGGTGGCAATTTCCAGTACAAGACTGAAAAATATAGCTCAACTGTCAACAACCTTGATTCTGCAGATGCAAGGTTGAAAAAGGATGTAGCAAATTTGGATGAATCAGTTCATTCTTTTACTGTTTTGAAGGTAGCAATAATTGTACAAGTACTTCTCGTCAGCTGTTTGGTCGTTCTTTGGATTTTAGTTCGCAGTGCCAGAGCAGGAAAGAGACGTTACCGCTGA 600 0.4283 MGSACFVSPIFVCVLFSSIASCFSSPHLLGVHPLDEKYYAREVINCKDGSKSFTRNRINDNFCDCVDGTDEPGTSACPAGKFYCKNVGSTPKFIYSSQVNDRFCDCCDGSDEYDSNFHCPNTCVMGGNFQYKTEKYSSTVNNLDSADARLKKDVANLDESVHSFTVLKVAIIVQVLLVSCLVVLWILVRSARAGKRRYR* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00534 199 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 12 157 IPR039794 -
Pte6g00534 199 Pfam Glucosidase II beta subunit-like 12 142 IPR028146 -
Pte6g00534 199 Gene3D - 74 114 IPR036055 GO:0005515
Pte6g00534 199 CDD LDLa 77 112 IPR002172 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00534 Pte-Chr6 6772156 6773435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00534 18 168 Calmodulin-binding Proteins AT5G56360 49.080 7.97e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00534 - - jre:108993721 251.906