Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00525 ATGCTTATACTTCTTTTACTTCTGTTTCTCTCTCCTACCACGCCCACTCTCTCTCTAACCCAAGATGGTCTCTACCTTCTTCAAGTGAAGCTTCAACTCTCAGACCCTACTGACTCCCTCTCTTCCTGGAACCCTCGTGATGACACCCCATGCAACTGGTTTGGCATCACTTGTGATCCACGCACAGGCAGAGTCAACTCAGTTATCCTCCCTAACTCTCAGCTCGCCGGACCTTTCCCCATCTTTCTTTGCCGCATACCTTATATCTCCAACATTACCCTCGTCAACAACTCTATAAACTCCACACTCTCCGCCGTTGATTTCTCCACCTGTCAAAATCTCCAATATCTCGACCTCTCCGAGAATCTCCTTGTGGGTCCTCTTCCTCCCTCCCTCGCTGATACCCCAAACCTCCGGTTCCTCAACCTGTCTGGTAACAACTTCTCCGGCGATATCCCGGCAAGCTTCGGTCACTTCCCGAAGCTGGAATATCTTATTCTGTTTGAGAATCTCTTGAATGGGACGATACCCAGTTTTCTGGGTAACATTTCAACTCTCAGGGAACTCCGAATTGCTTACAACCCGTTTACTCAGAATTCGATTCCGAGTGAACTCGGTAACTTGACGAACCTTGAGTATCTATGGTTAGCCGGCTGTAACCTTGTGGGTACAATTCCGACGAGTTTGACTAAGCTGCCTCGGCTAACGAACCTCGACTTGTCAGAGAATGGACTCACTGGGTCTATACCGACCTCCATTATTGAGCTCAAAAGCATAATTCAAATTGAGCTCTACAATAACTCTCTCTCAGGGGTGTTGCCTAAGGGACTGTCAAATTTGACTAATTTGAGAAGATTTGACCTTTCCATGAACCAGCTGACTGGGACGATTCCTGATGAGCTGTGCAGGTTACCACTTGAGTCTCTGAATTTGTATGATAACAAATTTGAAGGGTCCTTACCTGAGAGTATAGCTCTGTCACAGAATTTGTACGAGCTCAAGCTATTCAACAATAAACTTAGCGGGCAACTTCCGAGTGAACTCGGCAAGAACTCGGGGTTACAGAGTCTAGACGTGTCGTACAATGAGTTTTCTGGTGAAATTCCAGTAAAATTGTGTGAACACGGGGTTCTGGTAGATCTTATTTTGATATTCAATTCGTTTTCCGGGAAAATACCCGAGAGTCTGGGAAAATGTCAGAGCTTAAACAGAGCACGTCTTAGGAACAATGAGCTTTCAGGGAATGTCCCTGAGGCGTTTTGGGGTCTACCTCATTTGTATTTACTTGAAGTTGTTGAGAATTCTTTATCTGGGGAGATTTCCAGTTCAATATCTGGTGCAAACAATCTTTCAGTTCTGTTAATTTCTAGAAACCAATTTTCAGGGTCCATACCAGAAGAAATTGGGTTTTTGAGTAACCTACTTGAATTTTCTGGAAGCAATAATAAGCTATCTGGTACAATTCCTAGAAGCATAGTAAAGTTGAGTCAGCTTGGTAAGCTCGATCTAAGCTATAATGAACTTTCAGGCGGGATCCCACCTGGAATCCATGGTTTGAAGAAGCTGAATGAGCTTAATTTGGCGAACAACGAGCTTGATGGTGAAATTCCTGATGAGATTGGAAGCTTGCCAGGTCTTAATTTTCTTGATCTTTCAGGAAATTACTTTTCTGGTGTTATTCCAACTGGACTGCAAAATTTGAAACTGAATTTGCTTAACTTGTCGAACAATCAACTTTCCGGCGACATCCCTCCCCTTTATGCGAATGAAAATTATAGAACTAGCTTCCTTGGGAATCCAGGTCTTTGTGGGGACCTTCCCGGACTTTGCACAGGTTTAGGTGAGAGTAAGAGACAGCAGTGGATTCTCAGATCAATTATTTTGATCGCTTCCATTGCTATTGTCACCGGGTTAGCTTGCTTTTACATGAAATACCGAAAATTCAAGAAGATGAAAGAGGGGCATTCCATGACAAAATGGAAGTCTTTCCATAAGCTTGGATTCAGTGAGTTTGAGGTCGTTAAATGCCTTGACGAAGACAATGTCATCGGAGCTGGAGCTTCTGGGAAAGTCTACAAAGTTACACTCAGTAACAGCGAGGTAGTCGCGGTCAAGAAACTTTGGAGATCGAATAAGAACGAAAACCGTAGTGAAGGATCAGAGAAAGATGGATTTGAAGTTGAAGTGGAAACACTGGGAAATATTAGGCATAAAAATATTGTAAGGTTATGGTGTTGCTGCACCAGTGGGGAGAGCAAGCTTCTTGTATATGAATATATGCCGAATGGAAGCCTGGGCGATTTGTTGCATGGGAACAAGGGGGGTCTGTTAGATTGGCCAACAAGATATAGGATTGCCCTTGATGCAGCTGAAGGGCTGTCATATCTGCATCACGATTGTGTTCCACCAATTGTTCACAGAGACGTCAAATCTAACAATATATTGATAGATGCAGAGTTTGGGGCTAAAGTTGCCGACTTTGGAGTTGCTAAAATTTTTAGAGGAGCCACCCTAGGGGCGGAATCCATGTCTGTCATAGCAGGTTCTTGGGGCTACATCGCACCAGAATATGCTTATACTCTGCGAGTAAATGAGAAGAGCGACATTTATAGTTTTGGAGTGGTCATATTGGAGTTAATAACAGGGAAGCCTCCCGTTGGTCCAGAGTATGGGGAAAAGGACTTGGTTAAATGGGTTTGCACAACTTTGGAGCAGAAAGATGTTGACCATGTGATTGATTCTAACCTGGAGTCTATTTACAAGGAAGAAATTTGCAAGGTGCTCAACGTAGGGCTTCATTGCACTAGCTCACTGCCAATCAACCGCCCTTCCATGCGCAAAGTGGCGAAGATGTTGCAAGAAGCAGTCTCTGATGGGAGGACCAAAACTGTTAAGGATGGGAGACTCTCCCCTTATTACTATGAAGAGGGCTTTCATCAAGGTGGCATACTCTGA 2955 0.4403 MLILLLLLFLSPTTPTLSLTQDGLYLLQVKLQLSDPTDSLSSWNPRDDTPCNWFGITCDPRTGRVNSVILPNSQLAGPFPIFLCRIPYISNITLVNNSINSTLSAVDFSTCQNLQYLDLSENLLVGPLPPSLADTPNLRFLNLSGNNFSGDIPASFGHFPKLEYLILFENLLNGTIPSFLGNISTLRELRIAYNPFTQNSIPSELGNLTNLEYLWLAGCNLVGTIPTSLTKLPRLTNLDLSENGLTGSIPTSIIELKSIIQIELYNNSLSGVLPKGLSNLTNLRRFDLSMNQLTGTIPDELCRLPLESLNLYDNKFEGSLPESIALSQNLYELKLFNNKLSGQLPSELGKNSGLQSLDVSYNEFSGEIPVKLCEHGVLVDLILIFNSFSGKIPESLGKCQSLNRARLRNNELSGNVPEAFWGLPHLYLLEVVENSLSGEISSSISGANNLSVLLISRNQFSGSIPEEIGFLSNLLEFSGSNNKLSGTIPRSIVKLSQLGKLDLSYNELSGGIPPGIHGLKKLNELNLANNELDGEIPDEIGSLPGLNFLDLSGNYFSGVIPTGLQNLKLNLLNLSNNQLSGDIPPLYANENYRTSFLGNPGLCGDLPGLCTGLGESKRQQWILRSIILIASIAIVTGLACFYMKYRKFKKMKEGHSMTKWKSFHKLGFSEFEVVKCLDEDNVIGAGASGKVYKVTLSNSEVVAVKKLWRSNKNENRSEGSEKDGFEVEVETLGNIRHKNIVRLWCCCTSGESKLLVYEYMPNGSLGDLLHGNKGGLLDWPTRYRIALDAAEGLSYLHHDCVPPIVHRDVKSNNILIDAEFGAKVADFGVAKIFRGATLGAESMSVIAGSWGYIAPEYAYTLRVNEKSDIYSFGVVILELITGKPPVGPEYGEKDLVKWVCTTLEQKDVDHVIDSNLESIYKEEICKVLNVGLHCTSSLPINRPSMRKVAKMLQEAVSDGRTKTVKDGRLSPYYYEEGFHQGGIL* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00525 984 Gene3D Ribonuclease Inhibitor 20 174 IPR032675 -
Pte6g00525 984 Gene3D Ribonuclease Inhibitor 175 276 IPR032675 -
Pte6g00525 984 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 183 - -
Pte6g00525 984 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Pte6g00525 984 Pfam Leucine rich repeat 233 293 IPR001611 GO:0005515
Pte6g00525 984 SMART LRR_typ_2 519 543 IPR003591 -
Pte6g00525 984 SMART LRR_typ_2 280 304 IPR003591 -
Pte6g00525 984 SMART LRR_typ_2 495 518 IPR003591 -
Pte6g00525 984 SMART LRR_typ_2 232 256 IPR003591 -
Pte6g00525 984 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Pte6g00525 984 FunFam Receptor-like protein kinase HSL1 660 759 - -
Pte6g00525 984 FunFam Leucine-rich receptor-like protein kinase family protein 201 300 - -
Pte6g00525 984 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Pte6g00525 984 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 381 953 - -
Pte6g00525 984 ProSiteProfiles Protein kinase domain profile. 677 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00525 984 FunFam Receptor-like protein kinase HSL1 305 612 - -
Pte6g00525 984 Gene3D Phosphorylase Kinase; domain 1 659 759 - -
Pte6g00525 984 SUPERFAMILY Protein kinase-like (PK-like) 672 952 IPR011009 -
Pte6g00525 984 ProSitePatterns TNF family signature. 17 33 IPR021184 -
Pte6g00525 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Pte6g00525 984 SUPERFAMILY L domain-like 375 613 - -
Pte6g00525 984 Gene3D Transferase(Phosphotransferase) domain 1 760 969 - -
Pte6g00525 984 Pfam Protein kinase domain 679 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00525 984 SMART serkin_6 677 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00525 984 ProSiteProfiles Leucine-rich repeat profile. 568 590 IPR001611 GO:0005515
Pte6g00525 984 Gene3D Ribonuclease Inhibitor 277 611 IPR032675 -
Pte6g00525 984 PRINTS Leucine-rich repeat signature 235 248 - -
Pte6g00525 984 PRINTS Leucine-rich repeat signature 495 508 - -
Pte6g00525 984 SUPERFAMILY RNI-like 72 413 - -
Pte6g00525 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 760 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00525 Pte-Chr6 6710368 6713536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00525 15 983 Receptor kinase-like Gene Family AT1G28440 61.398 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte6g00525 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00525 - - mnt:21393816 1341.64