Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00479 ATGTGGCTGATCGATATGGGGTGTTGCCACTCAACCAGTAGCCAGAGTTTTTGTTGTAGTGGGAGCAATGGAGGGACTGTCTGTCCTTCTTGCTTGCAATTAGGATTCTGTAGGAAAAACAGAAGGAAAAAGACATTTGCGGATCACATTGTTTCACTGCAGCATTTAGCATCCATACCTAACCGCATTTTCACTAATGGAAAAACCAGAACATCTTGCATATTTACACAGCAAGGTCGCAAGGGTATCAATCAGGATGCAATGGTTGTGTGGGAAGATTTCATGTTGGAAGATGCTGTCTTCTGTGGTGTCTTTGATGGCCATGGTCCACATGGCCACCTTGTTGCACGCAAAGTCAGAGATGCATTGCCTATAAAGCTGCTTTCCTTTTTGCATACTTCCCTGTCGAGGAAAAATGGCTCAGTTTCAACTTGCTACAAAGAGAAGCTGAAGTTGCCTGATGGTGTAGAGATTGAGAAGGATTGTCCAGGCGAGGAAAATGTGAATTCGATGTGGAGAGAAGCTTTCCTAAATTCGTACAAGGCTATGGATAAAGAGCTAAGATCTCACCGTAATTTGGACTGCTTTTGTAGTGGCAGCACCGCTGTAACTTTAGTGAAGCAGGGGTTAAATTTATTTATCGGCTACATTGGCGATTCACGTGCTATCATGGGATCCAAGGACAGTAATAACTCAATGGTGGCAACTCAGTTGACTGTTGATTTGAAGCCTGATTTACCAAGTGTGTTTCTGGTTACTGTTGCATTTTATTATTGCCAGTAG 783 0.4317 MWLIDMGCCHSTSSQSFCCSGSNGGTVCPSCLQLGFCRKNRRKKTFADHIVSLQHLASIPNRIFTNGKTRTSCIFTQQGRKGINQDAMVVWEDFMLEDAVFCGVFDGHGPHGHLVARKVRDALPIKLLSFLHTSLSRKNGSVSTCYKEKLKLPDGVEIEKDCPGEENVNSMWREAFLNSYKAMDKELRSHRNLDCFCSGSTAVTLVKQGLNLFIGYIGDSRAIMGSKDSNNSMVATQLTVDLKPDLPSVFLVTVAFYYCQ* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00479 260 SMART PP2C_4 55 260 IPR001932 -
Pte6g00479 260 SUPERFAMILY PP2C-like 62 250 IPR036457 -
Pte6g00479 260 ProSiteProfiles PPM-type phosphatase domain profile. 71 260 IPR001932 -
Pte6g00479 260 PANTHER PROTEIN PHOSPHATASE 73 245 IPR015655 GO:0004722|GO:0006470
Pte6g00479 260 Pfam Protein phosphatase 2C 160 247 IPR001932 -
Pte6g00479 260 CDD PP2Cc 77 247 IPR001932 -
Pte6g00479 260 Gene3D - 62 250 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00479 Pte-Chr6 6297353 6299961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00479 6 247 PP2C-type Phosphatase Gene Family AT1G03590 60.331 3.71e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00479 - - qsu:111998571 377.867