Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00476 ATGGCGGATGCCAGTCCCCGGACTGATATTTCTACAGATGCAGATACAGATGAGAAGAATCAAAGGTTTGATAGAGGTCAATCCCTCGTTGTTGCAGTATCTGACTCAAGTGACAGGTCAAAGGATAAAACAGATCAGAAGACTCTCCGCAGACTAGCTCAAAATCGCGAGGCTGCAAGGAAAAGCCGTTTAAGGAAAAAAGCCTATGTTCAACAGCTAGAGAGTAGTCGTTTGAAGCTAACTCAACTAGAACAAGAACTCCAGCGAGCACGACAGCAGGGAATATTTATATCAAGCTCAGGGGACCAAACACATTCCATGAGTGGAAATGGCGCAATGGCATTTGATGTGGAATACGCTAGATGGCTGGAAGAGCAGAATCGGCAAATCAATGAGCTCAGATCAGCTGTAAGCTCCCATGCAAGTGATACAGAACTTCGTATTATTGTCGACGGTGTCTTGGCACATTACGAAGAGATCTTTAGGCTGAAGGCAAATGCAGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCGGCTGAACGTTGCTTTTTGTGGCTTGGTGGTTTTCGCTCGTCTGAGCTTCTCAAGCTTCTTATAAATCAATTGGAGCCTCTCACAGAACAGCAGCTGGTTGGCATTACCAACTTACAGCAATCGTCACAACAGGCTGAAGATGCATTATCTCAGGGGATGGAGGCTTTACAGCAGTCGCTATCTGAGACATTGTCTAGTGGATCTCTGGGCTCTTCTGGTTCCTCGGGAAACGTCGCAAACTACATGGGTCAAATGGCTATGGCTATGGGCAAGCTAGGGACGCTTGAGGGGTTCATTCGCCAGGTAAAACTTTGCTGGTGCTTTGGTTATCCTTCCATAAAACTTTACTATCGTTCAATACCCATTTTTCGAGACGAGCTTCTTAGCTTAGAAATACGTGTCTTTGCCATAGTATTCCTTGTTTTTCCTGCTCTTCATCGATGTGGGACTTCATTTGCTCATATATTTTAG 1020 0.45 MADASPRTDISTDADTDEKNQRFDRGQSLVVAVSDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYARWLEEQNRQINELRSAVSSHASDTELRIIVDGVLAHYEEIFRLKANAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLINQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQVKLCWCFGYPSIKLYYRSIPIFRDELLSLEIRVFAIVFLVFPALHRCGTSFAHIF* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00476 339 CDD bZIP_HBP1b-like 47 99 - -
Pte6g00476 339 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Pte6g00476 339 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Pte6g00476 339 ProSiteProfiles DOG1 domain profile. 112 339 IPR025422 GO:0006351|GO:0043565
Pte6g00476 339 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Pte6g00476 339 MobiDBLite consensus disorder prediction 10 24 - -
Pte6g00476 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Pte6g00476 339 FunFam BZIP family transcription factor 46 95 - -
Pte6g00476 339 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
Pte6g00476 339 Coils Coil 123 143 - -
Pte6g00476 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Pte6g00476 339 Coils Coil 66 93 - -
Pte6g00476 339 MobiDBLite consensus disorder prediction 1 48 - -
Pte6g00476 339 PANTHER TRANSCRIPTION FACTOR TGA9 19 284 - -
Pte6g00476 339 Gene3D - 46 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00476 Pte-Chr6 6259743 6270225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00476 1 285 bZIP Transcription Factor Family AT3G12250 79.649 4.01e-160 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g00476 DOG1 5.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00476 K14431 - zju:107428714 475.322