Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00473 ATGGCGTCAGGAAACCCGGCGGTTGAATGGCACGTGCGACCTCCAAACCCGAAGAACCCGATCGTGTTCTTCGATATAACCATTGGTAATATTCCGGCTGGTAGAATCAAGATGGAGCTTTTCGCCGACATTACCCCTAAAACCGCCGAGAATTTCAGGCAGTTCTGTACAGGGGAGTACAGAAAGTCTGGATTGCCTGTTGGATACAAAGGCTGTCAATTTCATAGAGTGATTAAAGATTTCATGATTCAAGCTGGTGATTTTGTTAAGGGTGATGGTAGTGGATGTGTTTCCATTTATGGTCACAACTTTGACGATGAAAATTTCATTGCCAAGCACACTGGTCCTGGACTTTTATCAATGGCAAATAGTGGACCAAACACAAATGGCTCTCAGTTCTTTATCACTTGTTCAAAATGCGATTGGCTGGACAACAAGCATGTTGTTTTTGGGAGAGTGCTGGGAGACGGTCTTCTGGTTGTAAGGAAGATAGAGAATGTGGCTATTGGACCGAACAACAGGCCTAAATTGTCTTGCATTATTGCTGAGTGTGGAGAAATGTAG 564 0.4415 MASGNPAVEWHVRPPNPKNPIVFFDITIGNIPAGRIKMELFADITPKTAENFRQFCTGEYRKSGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHNFDDENFIAKHTGPGLLSMANSGPNTNGSQFFITCSKCDWLDNKHVVFGRVLGDGLLVVRKIENVAIGPNNRPKLSCIIAECGEM* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00473 187 FunFam Peptidyl-prolyl cis-trans isomerase 9 187 - -
Pte6g00473 187 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 22 187 - -
Pte6g00473 187 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 185 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PIRSF Peptidylpro_ismrse 9 187 IPR024936 GO:0003755
Pte6g00473 187 SUPERFAMILY Cyclophilin-like 10 187 IPR029000 -
Pte6g00473 187 Gene3D - 9 187 IPR029000 -
Pte6g00473 187 CDD cyclophilin_ABH_like 20 185 - -
Pte6g00473 187 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 23 186 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 144 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 74 86 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 40 55 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Pte6g00473 187 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 69 86 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00473 Pte-Chr6 6249870 6253753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00473 34 184 U-box Gene Family AT5G67530 44.079 1.60e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00473 K09567 - zju:107428673 370.163