Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00470 ATGGCCAACGAAAGCTCTATTACTCAGAACCAAAAGCCATACGAGCAAGACGATGTAACGGAAGAAGATGGAGATGATGACTCTCAGGACTCAGACTGGGACGATGTTGAAACCGACACTGAAACTGATTTCCTTTGTTTGTTCTGCGATTCCAGCTACTCATCCTCCGATTCCTTGTTCGAACATTGCAATTCAGCTCATCACTTCGATTTTCACTCTATACGAAAAGCTTTGAATTTGGATTTCTACAGTTGCTTTAAGCTCATCAATTACATTCGAGCTCAGGTAGCCGATAAAAGATGTTGGAGTTGTGAGATAGAATGTCCATCCCGCCAGGATTTGCAGAATCACTTGCATGAGATAAATTTACAGAATATTGGGACCCATTGGAACGACGACAAATATCTTGAACCTTTCATGAAAGATGATTCACTCTTGTTCAGTTTTAGTGATTATGAAGAAGGGGATTGCGATGAAGTTGACAGAGCTGAAATTGTAAGGGAATTGAAAGAAGCTGGGAAAATTCCAGTTGATTATGACAGTACTGATAAAAGAGGGGTGCTTGATGACACAACCTGCAAAGCTAGTAAAGAAAAAGAATTGGATGCTGTTTCTAATGGATGTTTGAATCCAAGTTCATCTAAAGTGGAGGTTATGATTGACTTGGATTCAAGAGAATGTGCTTCACTGTCTACTAAGGAGACAAAAAGTAAACACTTGAAAGCTTATTTACCAAATATCGAAGAAAAAGATATTAAGAATGTCAACGAAAACTACTTTGAGGCGTATGGTTCATTTGGAATCCACAGGGAGATGCTAAGCGATAAGGTCAGAATGGATGCTTATGGCCAAGCTCTCTTGAAAAATCCTTCTCTTCTTAATGGGGCTATTGTTATGGATGTAGGATGTGGAACTGGAATTCTAAGCCTATTTTCAGCTCAAGCAGGGGCTTCAAAAGTTATTGCAGTTGAAGCTAGCCAAAAGATGGCAGCAGTGGCATCTCAGATAGCTAAAGACAACGGTCTTTTTCTATTTAAGACACAAAGTAAAGAAGGTATCCACCAAAGTGGGGTAATAGAAATTGCTGAAGGAATGGTTGAGGAGATTGATAGATCTATCCAAATTGAACCTCACAGTGTTGATGTACTAGTGAGTGAATGGATGGGATACTGTCTGCTCTATGAATCAATGCTCAGTTCAGTTCTCTATGCTCGGGATCGATGGTTGAAACCTGGAGGTGCCATTCTCCCAGACATTGCCACCATTTTTTTAGCAGGATTTGGAAAAGGTGGTACTAGTCTTTCATTTTGGGAAAATGTGCATGGTTTTAACATGTCCTGTGTTGGTAAAGAACTGGTTGAAAATGCTGCTCAAATTCCTATTGTTGATGTAGTTGATTGTCAAGATGTGGTCACCAATACAGCTGTCCTTAAGAGGTTTGACTTGGCAACAATGAAACCTGATGAAATGGATTTCACATCAACTGCTTTACTGGAACCAAAGAGTGCTCACGAAGATCAAATGAAGGATTTGAAATCTGTAAGCTTCTGCTATGGTGTTGTTCTCTGGTTTGAGACTGCTTTTACTAGTAGATTCTGCCAGGAAATGCCAGCCGTGTTGTCAACATCTCCTTACACTCCTAAGACACACTGGTCTCAGACAATTCTGACCTTCCGGGAGCCTATTGCCTTAGGATATAGCAAAGAAAGTGTGGACAGTTTGGTGGCCATTGGGACTGGTGGATGTCCTGCTGTGAAAATTGATTTGCGTGTGAGCATCGTTCGCTCTACTGAGCATCGCAGCATTGATATTTCTTTGGAAACTTCTGGTGTTGGATCTGATGCTCGGAGACGCGATTGGCCAGCCCAACTTTTTCCTTTGCGTTAG 1887 0.4112 MANESSITQNQKPYEQDDVTEEDGDDDSQDSDWDDVETDTETDFLCLFCDSSYSSSDSLFEHCNSAHHFDFHSIRKALNLDFYSCFKLINYIRAQVADKRCWSCEIECPSRQDLQNHLHEINLQNIGTHWNDDKYLEPFMKDDSLLFSFSDYEEGDCDEVDRAEIVRELKEAGKIPVDYDSTDKRGVLDDTTCKASKEKELDAVSNGCLNPSSSKVEVMIDLDSRECASLSTKETKSKHLKAYLPNIEEKDIKNVNENYFEAYGSFGIHREMLSDKVRMDAYGQALLKNPSLLNGAIVMDVGCGTGILSLFSAQAGASKVIAVEASQKMAAVASQIAKDNGLFLFKTQSKEGIHQSGVIEIAEGMVEEIDRSIQIEPHSVDVLVSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDIATIFLAGFGKGGTSLSFWENVHGFNMSCVGKELVENAAQIPIVDVVDCQDVVTNTAVLKRFDLATMKPDEMDFTSTALLEPKSAHEDQMKDLKSVSFCYGVVLWFETAFTSRFCQEMPAVLSTSPYTPKTHWSQTILTFREPIALGYSKESVDSLVAIGTGGCPAVKIDLRVSIVRSTEHRSIDISLETSGVGSDARRRDWPAQLFPLR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00470 628 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 256 607 IPR025799 GO:0016274|GO:0018216
Pte6g00470 628 Pfam C2H2 type zinc-finger (2 copies) 46 122 IPR041661 -
Pte6g00470 628 Gene3D - 420 620 - -
Pte6g00470 628 SUPERFAMILY beta-beta-alpha zinc fingers 29 158 IPR036236 -
Pte6g00470 628 Pfam Methyltransferase domain 298 413 IPR041698 -
Pte6g00470 628 MobiDBLite consensus disorder prediction 1 36 - -
Pte6g00470 628 MobiDBLite consensus disorder prediction 18 36 - -
Pte6g00470 628 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 47 610 IPR025799 GO:0016274|GO:0018216
Pte6g00470 628 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 263 565 IPR029063 -
Pte6g00470 628 CDD AdoMet_MTases 298 416 - -
Pte6g00470 628 Gene3D Vaccinia Virus protein VP39 247 417 IPR029063 -
Pte6g00470 628 FunFam Protein arginine N-methyltransferase 6 252 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00470 Pte-Chr6 6182864 6187171 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00470 44 627 C2H2 Transcription Factor Family AT3G12270 54.778 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00470 K11436 - cave:132183189 727.243