Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00455 ATGTGGAGATTCAAGCCTTTCTCGCAAAAGGAGCCAACTGGGCTTGAAGGCCGCACAGTTGATGTTGGCAATGTTAAGATACACATCCAGAAGGCCATTGCTGAAGGAGGGTTCTCATGTGTCTATTTTGCTCGTGATGCTGTTCACATGTCTAAGCAATATGCTTTGAAGCACATGATTTGCAATGATGATGAGTCGCTCGAGTTGGCTATGAAGGAAATATCTGTGATGAAATCACTGAAAGGACATCCCAATGTTGTCACACTCTGTGCACACGCAATGTTTAACATGGGTAGGACAAAGGAGGTGCTAGTTGTGATGGAATTCTGTGAAAAATCTCTGGTTAGTGTTCTAGAGAGCAGAGGAGTGGCATATTTTGATGAAAAACAGGTGCTTTCAATATTCAGGGACGTGTGTAATGCTGTATTCGCCATGCACTGCCAATGCCCTCCCATTGCCCATCGAGACTTGAAAGCTGAAAATCTATTATTGAGTTCTGATGGATTGTGGAAGTTGTGTGATTTTGGAAGCACCTCTACAAACCATAAGCGTTTTGAGAAGCCAGAAGAAATGGGTATTGAAGAAGACAATATCAGGAAATACACAACACCTGCTTATAGAGCCCCTGAGATGTGGGATCTATTCCGGAGAGACCTTATAAGTGAGAAGGTGGACATTTGGGCTCTCGGATGCCTCCTCTTCCGCATATGCTACTTCAAGAATGCATTTGATGGAGAGTCAAAACTTCAAGTATTAAATGGAAACTATCGGATTCCTGAGTCGCCCAAATACAGCTCCTTTATCACAGACCTCATTAAAGATATGCTTCTGCCTAGTCCAGAAGACAGACCTGATATCATGCAGGTCTGGTTTCGTGTTAATGAGAAGTTACCTGCTAATCTGCAAAAGTCATTACCTGATAGACCGCCTGAATTACCCTCTACTAACAACCATGAAGGTGCTGCAAAGCCATCAAATAGGTCACCTCCAATGCCATCTCGAAGTCCACCATCACCACCTGCTTCTGTTAATATGTCACAGCAGTCCCAGCCTACAAGAGGTGGTGGAGGTGCGGGGCAGCTTGGTTCTTTCTGGTCAACTCAACATGTGAAAGAGGTACAAGTGACTAAGGATAAGAGCGTGCCTGTATTTGATGAAGAACCACATAGACACCACATATCCTCCAAAAATGATAGGGTTTATCCGAATACTCATGCTTCACCTAAAAATGCTACTCCTAGCAAGGTAGAGAATACACAAGCTCCAGTTGTAAAAAGAAACGTACAGGATAAATTGCAAAATTCTGGGGAAGAACTTTCAAAGGATTTTGAAATCACTTTCCAAAGGGATAATGCTCAAAGAACTGAAAAACGAACAAGCACGGAGGACAAAACCATTTTCCAAGATCAGACTTTTAATACTTTTGTTGCTGAATTTGATACTAATAAATTAAACAAGTTGAGTAGTAACAAGATGGAAAAGGAAGAGGCACTGGAGGCTGAAGTAAAGGAATTGAAAGAGCAGCTAAAGCAAGCAAATTTGGAGAAAGCTGAAATGACAGCAAAAATTGAAAAATTGTCTGCCATATGTCGCTCTCAGAGGCAGGAGATACAGGATCTTAAAGGTACACTTGCAGCAAGAACTCCTTCACCGAGTAAAGATGCCCTTAAAAATCATTCTTCTCCAGGAATACAGTCCAATATAACTCTGACGAGGGATAAAACTGAAATAGCTAGGGAACCCCAGGAAGCAAAATCTGATTGGAAAACTCCTAGCCCAGAGCCAAAGGTGTGGCAAGCTTTTCCTGAGGAGTCCAACCCTCAGTTACGTAAATCATCTGACAGCACTTCCAAATCTGTTAGAACCAAAAGCAATGTGCAGCAGCAGATCAATCCAGTTGCTCTGCCAACTTCGGGTTTTGATTCGTGGGGCTTTGGAGCTGATAGTTTTTCTGTTGTACGTGGTGGTAGTGTATCAAAGTCCTCTACTGGAGGAAATAATGCTCAGGTCTCCAGTGACAAGAAGACATTCGAAAACAAACCATCTCAACCTGCTGGATGGGCTGGTTTTTGA 2073 0.4269 MWRFKPFSQKEPTGLEGRTVDVGNVKIHIQKAIAEGGFSCVYFARDAVHMSKQYALKHMICNDDESLELAMKEISVMKSLKGHPNVVTLCAHAMFNMGRTKEVLVVMEFCEKSLVSVLESRGVAYFDEKQVLSIFRDVCNAVFAMHCQCPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFRRDLISEKVDIWALGCLLFRICYFKNAFDGESKLQVLNGNYRIPESPKYSSFITDLIKDMLLPSPEDRPDIMQVWFRVNEKLPANLQKSLPDRPPELPSTNNHEGAAKPSNRSPPMPSRSPPSPPASVNMSQQSQPTRGGGGAGQLGSFWSTQHVKEVQVTKDKSVPVFDEEPHRHHISSKNDRVYPNTHASPKNATPSKVENTQAPVVKRNVQDKLQNSGEELSKDFEITFQRDNAQRTEKRTSTEDKTIFQDQTFNTFVAEFDTNKLNKLSSNKMEKEEALEAEVKELKEQLKQANLEKAEMTAKIEKLSAICRSQRQEIQDLKGTLAARTPSPSKDALKNHSSPGIQSNITLTRDKTEIAREPQEAKSDWKTPSPEPKVWQAFPEESNPQLRKSSDSTSKSVRTKSNVQQQINPVALPTSGFDSWGFGADSFSVVRGGSVSKSSTGGNNAQVSSDKKTFENKPSQPAGWAGF* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00455 690 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 379 398 - -
Pte6g00455 690 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00455 690 MobiDBLite consensus disorder prediction 540 641 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 654 679 - -
Pte6g00455 690 Coils Coil 484 543 - -
Pte6g00455 690 CDD STKc_GAK_like 26 298 - -
Pte6g00455 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pte6g00455 690 MobiDBLite consensus disorder prediction 379 417 - -
Pte6g00455 690 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 340 363 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 605 636 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 553 572 - -
Pte6g00455 690 SUPERFAMILY Protein kinase-like (PK-like) 28 340 IPR011009 -
Pte6g00455 690 MobiDBLite consensus disorder prediction 301 363 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 573 590 - -
Pte6g00455 690 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00455 690 MobiDBLite consensus disorder prediction 399 417 - -
Pte6g00455 690 PANTHER SERINE/THREONINE PROTEIN KINASE 1 676 - -
Pte6g00455 690 MobiDBLite consensus disorder prediction 654 690 - -
Pte6g00455 690 Pfam Protein kinase domain 28 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00455 Pte-Chr6 5326417 5330954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00455 26 294 CBL-interacting serine-threonine protein kinases AT5G35410 30.345 3.38e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pte6g00455 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00455 K08853 - qsa:O6P43_001313 919.457