Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00454 ATGAGAAAGAAGCTTGACACGCGGTTCCCCGCGGCTCGGATAAAGAAGATAATGCAAGCAGACGAAGATGTTGGAAAGATAGCACTGGCAGTCCCAGTCTTAGTTTCTAAAGCCTTAGAACTATTTCTACAAGACCTTTGCGACCGTACATATGAGATAACCCTTCAGCGAGGGGCAAAGACTATGAACTCATTACATCTGAAACATTGTGTACATAGTTACAACGTGTTTGATTTTCTTAGAGACATAGTTAGCAGGGTTCCTGACTATAGTCATGGCCATTCTGAGGCTGCTGGTGATGACCGGACCCTTCCAAAGAGAAGGAAGGCTACTGGTGACGAGTGTAATGACAGTGATGAAGAGTCAAAAAGGAAAAAGATGCATGAATTGAGCCATAGTGGAAGCACTGGTCGTGGAAGAGGCCGTGGAAGGGGAAGAGGCCGTGGCAGGGGAAGAACTACAGAAAGAGAAAGGGAAGTTAATCAGCAGGATGCTGATATGGAGCATAACATATCAGTTGAGGAGAGAAGCATACAAAATTCCAATCCTGTAGCACCATTGGATGACACACCGGAGTCAATTGATTTGCCAAAGGAAAATATTGTACTTCCTGATGGTGGCAGTCCGTCAGTCCGAAAAATCGATTTAAATGCCAACATGAAAGAAACTGAGGATAAGACTGCTTTCACATCAACTCTGACCGCACTGCCTGACCCTACAGCTGAAACCAAACATGAGATACAAGTCTGGCCTCTTTCTGATGTGGACAAAATGGCGATTGACCCTCTTCAGCTTGCACAACTGGGGAAGCCGATGGATGAAGATGAGGAAGACTATGATGAGGAAGATTAA 852 0.4507 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVHSYNVFDFLRDIVSRVPDYSHGHSEAAGDDRTLPKRRKATGDECNDSDEESKRKKMHELSHSGSTGRGRGRGRGRGRGRGRTTEREREVNQQDADMEHNISVEERSIQNSNPVAPLDDTPESIDLPKENIVLPDGGSPSVRKIDLNANMKETEDKTAFTSTLTALPDPTAETKHEIQVWPLSDVDKMAIDPLQLAQLGKPMDEDEEDYDEED* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00454 283 MobiDBLite consensus disorder prediction 148 167 - -
Pte6g00454 283 MobiDBLite consensus disorder prediction 90 135 - -
Pte6g00454 283 MobiDBLite consensus disorder prediction 90 167 - -
Pte6g00454 283 MobiDBLite consensus disorder prediction 181 209 - -
Pte6g00454 283 FunFam dr1-associated corepressor homolog 1 86 - -
Pte6g00454 283 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pte6g00454 283 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Pte6g00454 283 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pte6g00454 283 SUPERFAMILY Histone-fold 4 94 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00454 Pte-Chr6 5320287 5324681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00454 1 270 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.475 2.75e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte6g00454 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00454 K21752 - qsa:O6P43_029748 338.191