Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00450 ATGATAGGACTGAGAATGAGGGATTCCAAAGTAAAATCTTCAAAAGCAATAACAAGCATCCTCTTGTGTTGCTTGAGCTTCAGTGTCTCAATCATCGATGCACAAACATCCAATTATTTTGGCTCTCAGTGTTCGAACACAACTTATAGTGCAGACAACTCAGGAACTACATATGCAGCCAATATAGGAAGCGTTCTCTCATTACTATCAACTGGTGCCGGTAGAGGGCTTAAGTACCAAAACGCTACTGCAGGAAATGACACAACAAACAAGGTTTACGGCCAATATGATTGCCGGGGAGATGCAAAGACAATATTCTGTGAATTCTGTGTGCATACTGCTGGAAAGGACATTTTACAGAGATGTCCTAACAGTATTTCAGCTATTGTCTGGTATGATGTCTGCATCCTGAGATACTCAAACCAGAAATTCTTTGGAGATGTCATCACATCTCCCTGGTGGAACAGGCTCGATAACCGGACTATTTCTGATCCTCAAGAGCCTGCAAAAGCTGATAATTTCATGCGAAGTTTGATAAAGTCAGCTATTGGCACACCCTTACTATATGCAAAGGGTGAATTTAATTTAAGTAACACTGAGCAGAGGTATGGATTTGTGCAGTGCAGTCGAGATCTTAGAGGTGTAGGATGTGGTCAATGCTTGGATTCATTGTTAAGCCATGTTCCAACATGTTGTGCTAAAAACCATGGGTGGATAGTTGTGGCTCCAAGTTGCTTTATTAGGTATGCGGATACTCTCTTCTATGAGGTTGATGAATCACCAGCACTTGGTCCTACAGATAAAGGACATGAGCACGGTTCTTCTACGTCAAGAATAGTGATTATCAGCATTGCAAGTGGAGTAGCAGCAGTCCTATTTTGCTTCTGTATCTACTTCTTAAGGCTCAGGCATAAAAAAACTGAAGGTCGGATGCTACAAGATACTGAGAACTACATTTTTAAGGAGGAATCACTGGATGCAGACCTTCCTATGATACCCTTTAGCGTGATTGAACGCAGTACTGATAATTTCTCACTAGCTTCTAAACTGGGGGAAGGTGGATTTGGGCCTGTGTACAAGGGCATTTTACCAGATGGAAGGCATGTTGCTGTAAAAAGACTGTCAATAACGTCTTCTCAAGGCGTAGAAGAGTTCAAGAATGAAGTAGTCTTAATAGCTAAATTGCAACACAGAAATCTCGTTAGACTGTTGGGTTGCTGCATAGAGGGAGGTGAAAAATTACTTATCTACGAGTACATGCCAAATTCTAGCCTTGATTTTCACCTCTTCGGTAAGGGCAAAGGAACTGCACTAGATTGGAAAATAAGATTAAACATCATTAATGGAATTGCAAAAGGGCTATTATATCTGCATGAGGATTCAAGGCTCAGAGTTATTCATAGAGACTTGAAAGCAAGTAACATTTTACTTGATGATCAGCTGAACCCCAAAATCTCAGACTTCGGCTTGGCAAGGACATTTGGAGGAGACCAAGAAGGATCAAACACAAGGAGAGTAATGGGTACCTATGGATATATGTCTCCGGAGTATGCTATGGAAGGATTATTTTCAATCAAGTCTGATGTCTTCAGCTTTGGGGTTCTTCTATTAGAAATCATCAGTGGCAGAAAGAATAGTGGATTTCATTATGAACATGGTCTTAGCCTCATTGTACATGTAAGCTTTTTCATGATTTCCCTATGTATTGTTTTACTCAATACAAACTAA 1728 0.4045 MIGLRMRDSKVKSSKAITSILLCCLSFSVSIIDAQTSNYFGSQCSNTTYSADNSGTTYAANIGSVLSLLSTGAGRGLKYQNATAGNDTTNKVYGQYDCRGDAKTIFCEFCVHTAGKDILQRCPNSISAIVWYDVCILRYSNQKFFGDVITSPWWNRLDNRTISDPQEPAKADNFMRSLIKSAIGTPLLYAKGEFNLSNTEQRYGFVQCSRDLRGVGCGQCLDSLLSHVPTCCAKNHGWIVVAPSCFIRYADTLFYEVDESPALGPTDKGHEHGSSTSRIVIISIASGVAAVLFCFCIYFLRLRHKKTEGRMLQDTENYIFKEESLDADLPMIPFSVIERSTDNFSLASKLGEGGFGPVYKGILPDGRHVAVKRLSITSSQGVEEFKNEVVLIAKLQHRNLVRLLGCCIEGGEKLLIYEYMPNSSLDFHLFGKGKGTALDWKIRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDDQLNPKISDFGLARTFGGDQEGSNTRRVMGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEIISGRKNSGFHYEHGLSLIVHVSFFMISLCIVLLNTN* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00450 575 Gene3D Transferase(Phosphotransferase) domain 1 420 563 - -
Pte6g00450 575 Pfam Salt stress response/antifungal 194 251 IPR002902 -
Pte6g00450 575 Pfam Salt stress response/antifungal 44 142 IPR002902 -
Pte6g00450 575 CDD STKc_IRAK 350 544 - -
Pte6g00450 575 FunFam Lectin-domain containing receptor kinase A4.3 420 564 - -
Pte6g00450 575 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Pte6g00450 575 SMART serkin_6 344 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00450 575 ProSiteProfiles Protein kinase domain profile. 344 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00450 575 SUPERFAMILY Protein kinase-like (PK-like) 329 552 IPR011009 -
Pte6g00450 575 Pfam Protein tyrosine and serine/threonine kinase 346 543 IPR001245 GO:0004672|GO:0006468
Pte6g00450 575 ProSiteProfiles Gnk2-homologous domain profile. 37 144 IPR002902 -
Pte6g00450 575 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 558 - -
Pte6g00450 575 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 308 419 - -
Pte6g00450 575 Gene3D - 36 144 IPR038408 -
Pte6g00450 575 Gene3D - 155 254 IPR038408 -
Pte6g00450 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pte6g00450 575 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00450 Pte-Chr6 5281140 5285437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00450 12 558 Receptor kinase-like Gene Family AT4G05200 43.234 5.13e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte6g00450 PK_Tyr_Ser-Thr 9.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00450 - - gmx:100796972 607.06