Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00448 ATGCATCCAGAAACTCAAAGAGTGGTGGTGATCCAGGATGCATCAAGAGACGTTAGTACAAGGGCAATAAAATGGGCTCTACCAGGCTTATCACTTAAGCCTGGAGATGAGCTCATACTACTTGCAATTCTTCACCAGGTTAATACCCCTATGGGATATAAGGTCAAGGTTGATTCCAGTTCTATGTTTCGGGCAAACAACAAAATTGTTGAGGAAGCACTTGTTATGAAGAAGGAGGAGTACAAGAATCATGCAGAGATAAGAAAAATTATCAATCTATTGCAAGCACAAAAGATTTCACTCCATACAGAAGTGCTTGCAGGCCTTTTTCCAGAAGTGGCTATAAATGCTGTGAAAAATTTGAAGGCAACATGGGTGATACTTGATAGGCAGATGAAAAAAGACAAGTACTTCTTGGAAGGACTTTCTTGTGGTTTGTCAAGAATGAGAAGAGATCACACCATTGAACACTTAAGAGTTCCAAAGGGTAAGAAAAGGGTCCAACAATCTCTTGAAAAGAGGACTGCTCCTGTAAAATATGAGGAAATGATTCCTGGCAGCTCAGACGAAGAAATTTCTAATAAGAGTAGGTTCTCTATTCACGTATCTTCCTCAGATTTCAATACAAACTCTTCAAAATTATATTCATCAAGTTCTAGCCTTTCAGAAGCAAAGTCTTCAAATGTTCAACAGCAGGATGAACAAGAACAAGGAAATGGGGAAACAACCAAAGGGGGTTCATTATTTTTCATTTCCGAGGGGGAAGAAGCAAGTGAAAGACAAGCGAAAAATGCGGACAGAAAACAAAACAAGGGTGGCGATCATGTCTGTCACATTCCTAAAGAATTTAACCGTTCTACCTGTTCTGTCTGCAAGAACAGGCGCCCAACCATTGGATGGAAGAGAGATTTCACGTTTGCGGAACTGCAAGCAGTGACGGAAGGATTTTCTGATAAGAATTTTCTATCAGAAGGTGGATTTGGTTCTGTCTATAAAGGGGAGCTAAATGGAATGAAAATTGCAGTCAAGCAGCATAAAAGTACAAGTCTCCAAGGAGAGAAGGAGTTCAAGTCTGAAGTTGAAGTGCTCAGCAAAGCAAGACATGAAAATTTGGTCATGTTGTTGGGGTCATGCTCAGAAGGAAATCATAGGCTTCTTGTATATGAATATGTCTGCAATGGCTCACTGGACCAACATTTATCACAGTACTCACGCACTATTCTTACTTGGGATGATAGGATGAAAATAGCCATTGGTGTTGCCAAAGGACTACAATATTTACATGACAAAAACATCATACATAGAGATATGAGACCAAACAATATCCTTGTAACTCATAATTTTAAACCCTTGCTTGGAGATTTCGGTCTGGCAAAAGAACATGATCCAGATCACTCATCAGATATGACAAGAGTTGTTGGAACTTTGGGATATCTGGCACCTGAATATGCAGAATCTGGGAAAGTGTCAACTAAGACAGATGTGTATTCTTTTGGGGTGGTTCTGCTTCAGCTAATAACTGGACTAAAGACTACAGATAAGAGACTTGGTGGAAAAAGTCTCGTGGGATGGGCAAGGCCACTTTTGAAAGAAAGGAATTATCCTCATTTAATTGATGAAAGGATCACGCATTCTCATGATTTCCACCAACTGTTCTGGATGGTTCGAGTTGCAGAGAAATGTCTCAGCAGAGATCCCAAGAAAAGATTATCGATGACTATGGTTGTAAACGCGTTGAGTAGAATAATAGATGGACACGGTAGTTGTGAATTAGGGCGCTGTTCTGCAAGATCTCCAGATTCAGACACTAGCGCATCAGACTCTCCAGCTCAATCTGAAGGCAGTGATGAAGGTTTCTCTGAAGCTCGTGGGAATGAAGAAAGCTTAGTTTCTTCATCATTAAGTAGCATGAACCAGCGGAGCATGAGGCTTCAACCATCTCCACCAATAAGCACAGCTTCTAGCAGCACAAACCAATTTAGTCATAGAATTCCGCAGTCACCTCCACTGGTAAGCACTTCTTCAAGCAGCATAAACCAACTCAGTTTTAGACCTCCACTGTCACCTCCAATTGTAAGCACTTCTTCAAGTAGATCAAGCATGTGCTCCGAGCATGATGATACAACCTCAGCAACTGCAACTACCACCGAAAAAGCAAGGGCAATTCCAAGAAATAAAAGTGGTTTTCTCTACGGGGATATGCTTCCTTAG 2211 0.4098 MHPETQRVVVIQDASRDVSTRAIKWALPGLSLKPGDELILLAILHQVNTPMGYKVKVDSSSMFRANNKIVEEALVMKKEEYKNHAEIRKIINLLQAQKISLHTEVLAGLFPEVAINAVKNLKATWVILDRQMKKDKYFLEGLSCGLSRMRRDHTIEHLRVPKGKKRVQQSLEKRTAPVKYEEMIPGSSDEEISNKSRFSIHVSSSDFNTNSSKLYSSSSSLSEAKSSNVQQQDEQEQGNGETTKGGSLFFISEGEEASERQAKNADRKQNKGGDHVCHIPKEFNRSTCSVCKNRRPTIGWKRDFTFAELQAVTEGFSDKNFLSEGGFGSVYKGELNGMKIAVKQHKSTSLQGEKEFKSEVEVLSKARHENLVMLLGSCSEGNHRLLVYEYVCNGSLDQHLSQYSRTILTWDDRMKIAIGVAKGLQYLHDKNIIHRDMRPNNILVTHNFKPLLGDFGLAKEHDPDHSSDMTRVVGTLGYLAPEYAESGKVSTKTDVYSFGVVLLQLITGLKTTDKRLGGKSLVGWARPLLKERNYPHLIDERITHSHDFHQLFWMVRVAEKCLSRDPKKRLSMTMVVNALSRIIDGHGSCELGRCSARSPDSDTSASDSPAQSEGSDEGFSEARGNEESLVSSSLSSMNQRSMRLQPSPPISTASSSTNQFSHRIPQSPPLVSTSSSSINQLSFRPPLSPPIVSTSSSRSSMCSEHDDTTSATATTTEKARAIPRNKSGFLYGDMLP* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00448 736 Gene3D Phosphorylase Kinase; domain 1 288 390 - -
Pte6g00448 736 Pfam Protein tyrosine and serine/threonine kinase 320 579 IPR001245 GO:0004672|GO:0006468
Pte6g00448 736 MobiDBLite consensus disorder prediction 162 188 - -
Pte6g00448 736 FunFam Proline-rich receptor-like protein kinase PERK8 278 390 - -
Pte6g00448 736 ProSiteProfiles Protein kinase domain profile. 316 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00448 736 MobiDBLite consensus disorder prediction 256 274 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 217 246 - -
Pte6g00448 736 Gene3D Transferase(Phosphotransferase) domain 1 391 590 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 594 736 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 255 274 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 625 721 - -
Pte6g00448 736 SUPERFAMILY Protein kinase-like (PK-like) 298 579 IPR011009 -
Pte6g00448 736 CDD STKc_IRAK 322 582 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 162 192 - -
Pte6g00448 736 Gene3D HUPs 1 143 IPR014729 -
Pte6g00448 736 ProSitePatterns Tyrosine protein kinases specific active-site signature. 432 444 IPR008266 GO:0004672|GO:0006468
Pte6g00448 736 PANTHER OS01G0253100 PROTEIN 219 584 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 597 615 - -
Pte6g00448 736 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 391 595 - -
Pte6g00448 736 MobiDBLite consensus disorder prediction 217 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00448 Pte-Chr6 5264780 5268498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00448 304 579 Trihelix Transcription Factor Family AT1G70460 49.650 4.72e-81 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte6g00448 PK_Tyr_Ser-Thr 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00448 - - qsa:O6P43_001559 717.227