Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00438 ATGTTATATTTAATATTTTTTAGTCTCAATAATATGCATCTTCAAATTAAATGGATACTCTTCAACATGACCCTCTACCTATTGATGCATCCAGCTGTGTCTGGTGAGAGATTTATAGCAGTGGATATCACATTCAGAAATACAGCAGGACCTGAAAAGCACCAAGCAGTGGCTGTGAGGAACAATGCAGACCTCTCAACATTCTACCGTTGCAGCTTTGAGGGCTATCAAGATACCCTCTATGCCCATTCTCTTAGGCAATTCTACAGAGAATGTGACATTTATGGCACTGTTGATTTCATATTTGGCAATGCTGCTGCAGTGTTCCAGACTTGCAACATATATGCCAGGAAACCTTTGCCAAATCAGAAGAATGCTGTGACGGCACAGGGCCGAACCGATCCGAACCAAACCACGGGAATCTCAATTCAAAACTGCACAATTGATGCTGCACCTGATTTGGCTGTGGACTTGAATTCTACCTTCAATTACTTGGGTAGACCATGGAAGCAGTACTCAAGGACTGTGTACATGGAATCATACATAGGAGAACTAATCACTCCAGTTGGATGGTTGGAATGGAATGGGACAGTTGGGTTGGATACACTCTACTATGGAGAGTACAAGAACCATGGACCTCGTGCTAACACAAGTGAGAGAGTTCAATGGCCTGGTTACAGCTTGTTGAATGCAACACAAGCTGTGAACTTCACAGTCTATAATTTTACATTAGGAGATACATGGCTACCTGAAACTGACGTACCCTTCGTTGGAGGGTTGATCAAGTTAGATTATTAG 798 0.4236 MLYLIFFSLNNMHLQIKWILFNMTLYLLMHPAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQTCNIYARKPLPNQKNAVTAQGRTDPNQTTGISIQNCTIDAAPDLAVDLNSTFNYLGRPWKQYSRTVYMESYIGELITPVGWLEWNGTVGLDTLYYGEYKNHGPRANTSERVQWPGYSLLNATQAVNFTVYNFTLGDTWLPETDVPFVGGLIKLDY* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00438 265 FunFam Pectinesterase 4 14 260 - -
Pte6g00438 265 Gene3D - 23 262 IPR012334 -
Pte6g00438 265 PANTHER PECTINESTERASE 32 252 - -
Pte6g00438 265 Pfam Pectinesterase 32 245 IPR000070 GO:0030599|GO:0042545
Pte6g00438 265 SUPERFAMILY Pectin lyase-like 26 259 IPR011050 -
Pte6g00438 265 ProSitePatterns Pectinesterase signature 2. 94 103 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00438 Pte-Chr6 5146930 5147727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00438 18 264 Carbohydrate Esterase AT3G10720 72.470 2.93e-137 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00438 K01051 - qsa:O6P43_029776 440.654