Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00437 ATGTCAGGCCTAACTTTGTCCCTCTTACCCTTCTTCCTCTTCTTAACTATTACGCCACTTCTACTAGCTCAAGTACAGCCACCTGCTCTTGCACCATTTCTAGATCCACAGCTCACAAAATCTCCTTCTTCTGCTGCCTGCAAGACCACTCTATACCCTAAACTCTGCCGTACAATCATCTCCACCGTTGGATCGTCCCCTTCCGATCCCTATAATTATGGGAAATTCTCAGTCAAACAATGCCTCAAGCTGACAAAGAGACTGGCGAAAGTGTTTGATGATTACCTCAACAAGCATTACTCCACAAATCTTAACCATGCAGAGCATGCTGCACTTGTGGACTGCAAGCAGCTCAATGAGCTCAATGTTGACTACTTAGAATCAGTGTCGAGTGAGCTGAAATCTGCTATGTCCTTAGATGTTGGACTTGTGGAAAGTGTCCAGACATACTTGAGTGCTATTGCGACGAATCATCAGACTTGTTATGACGGTCTGGTTGTGATCAAGAGCAGCATTGCTAATGCATTGGCAGCTCCACTCACCAACATGACTCAATTGACCAGTGTGTCACTTGGGTTGGTGACTCAAGCTTTGAATCGAAACTTGAAGAAGAACAAGAAGCGTGAAGTATCTGACGGTGGATCTTCCGCTGCTCACCCGTTTAGGGAGCCGCTTGAGAAACTCATCAAGGTACTTCGTAAAGAGCATTGCAAGCAAGCATTCAAATGCATTAGGGGTAAAGAAAGAATTCTCGAGGAAGAAGGAGGCAAAGGAATTCTTGTGAACGATGCTGTTATTGTGAACCAAAATGGAACAGACAACTTCACTTCCATCAATGCTGCCATCGAATTTGCTCCTAACAACACAAATGCCGAAGATGGCTATTTCGTAATCTACGTAAAACAAGGAGTTTACGAGGAATATGTTGTCGTGTCCAAGCAAAAAAAGAACATTTTGATTGTCGGAGATGGCATCAACAAGACCATCATCACAGGGAACCACAGTGTTGTTGATGGATGGACAACTTTCAATTCCTCTACCTTTGGTAAGCTCTCCTCGTTTTATGCAATGTATTCCATACCATGTCTTCTGAGTGTGTATATATATATATACATATTATAA 1122 0.4305 MSGLTLSLLPFFLFLTITPLLLAQVQPPALAPFLDPQLTKSPSSAACKTTLYPKLCRTIISTVGSSPSDPYNYGKFSVKQCLKLTKRLAKVFDDYLNKHYSTNLNHAEHAALVDCKQLNELNVDYLESVSSELKSAMSLDVGLVESVQTYLSAIATNHQTCYDGLVVIKSSIANALAAPLTNMTQLTSVSLGLVTQALNRNLKKNKKREVSDGGSSAAHPFREPLEKLIKVLRKEHCKQAFKCIRGKERILEEEGGKGILVNDAVIVNQNGTDNFTSINAAIEFAPNNTNAEDGYFVIYVKQGVYEEYVVVSKQKKNILIVGDGINKTIITGNHSVVDGWTTFNSSTFGKLSSFYAMYSIPCLLSVYIYIYIL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00437 373 NCBIfam pectinesterase inhibitor domain 7 196 IPR006501 GO:0004857
Pte6g00437 373 Gene3D - 262 361 IPR012334 -
Pte6g00437 373 PANTHER PECTINESTERASE 25 350 - -
Pte6g00437 373 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Pte6g00437 373 Pfam Pectinesterase 265 353 IPR000070 GO:0030599|GO:0042545
Pte6g00437 373 CDD PMEI-like_3 45 195 - -
Pte6g00437 373 Pfam Plant invertase/pectin methylesterase inhibitor 45 192 IPR006501 GO:0004857
Pte6g00437 373 SUPERFAMILY Pectin lyase-like 262 352 IPR011050 -
Pte6g00437 373 SMART PMEI_2 38 193 IPR006501 GO:0004857
Pte6g00437 373 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00437 Pte-Chr6 5144359 5146796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00437 46 348 Carbohydrate Esterase AT3G10720 54.693 7.07e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00437 K01051 - qsa:O6P43_001571 398.667