Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00432 ATGGATTCTCCAAACCCAGAAAGACATGAGAGAGAGGAATCACTTCCCGCACCACCAACTACCATTCCCCCTGACGTTGTTCCTGCAGTAATCGATTATGTAAAATCTGAGTCACCAAAGAAGGCTTTCACTCCAAAACGTTCTCCTGTGGCTAGGAGAGGCCTTGGAACAAAGGGAAATAAGATTAACCTCTACACCAACCATTTCAAAGTTGGAGTTTCCAAGACCGATGGATTTTTCTACCATTACAGCGTTGCTCTGTTTTATGAAGACAAAACTGCAGTAGAAGCCAAGGGTATTGGCCGAAAGGTGATGGACAAGGTGTACGAGACATACAAGTCAGATCTAGCTAACAAGGAGTTTGCCTATGATGGTGAAAAGAGCTTGTTCACCGTTGGCCCTCTGCCAAACAACAAGCTGGAATTTACAGTGGTTCTCGACGATCTTTCATCGAACAAGGTTGGCAGGAATGGCAGCCCTGGAGGTAGCCCATCTGAAGCTGATAAGAAGAGACTGAGGCGCCAAGGTCATTCGAAGACTTTCTCAGTTGAGATCAGCTACGCTGCCAGAATTCCAATGCAAGCCATTGCTGATGCCTTGCGTGGCAAGGAGTCTGATTATTTCCAAGAAGCTGTGAGAGTTCTGGACATCATATTGAGACAGAATGCAGCAAAGCAGGGTTGTCTTCTGGTACGGCAGTCATTCTTCCATAACAAGCCAGGCAACTTCACTGACCTGGGTGGTGGGGTGCAAGGTTGCCGTGGTTTCCATTCCAGCTTCAAAGCCACACAGGATGGTCTGTCGCTCAACATCGATGTTTCCACAACAATGATTGTAAAGCCCGGACCAGTGATTGACTTCCTCCTCTCCAATCAAAATGTGAAGCATCCAGATCACATTGACTGGACGAGAGCAAAGAAAATGCTGAAGAACCTGAGGATCAAGGCCAACAACATTGAGTACAAGATCACTGGACTTAGTGATAGATCCTGCAGGGAACAGACGTTTTCATTGAGGCAAAGAAGTGAAGGAGACGAGAAAGCTGTTGACATTACGGTGTGTGAATACTTTCATTCCGTTAAGAATATAGAGTTGCAATATTCAGCAGACATGCCATGCATTAATGTTGGAAAGCCAAAGCGGCCTTCTTATTTTCCGATAGAGCTCTGCACGTTGGTTTCTCTTCAACGTTACACAAAAGCTTTGACCAGCATTCAGAGGGCTTCATTAGTGGAGAAGTCAAGGCAGAAGCCTCAAGAGCGCATGAAAGCTTTATCTGATTCACTGAGAGACAGCGCTTATGGATCTGATCCTATGCTCAAGCAATCTGGAATTTCAATCAACGTTCAATTCCCTCAGGTTCAGGGCCGAGTTCTGCAAGCCCCAAAGCTTAGAGTCGGAAATGGAGAAGATTTCTTTCCTCGGAATGGGAGGTGGAACTTCAACAACAAGAAATTGGTAGAGCCTGTGAAGATTGAGCGGTGGGCTATTGTAAATTTCTCAGCTCGCTGTGATATGAGAAACTTGGTCAATCAGATGATCAGGTCTGGAGAGTCCAAAGGGATTCTTGTAGAATCTCCTTTTACTGTTTTTGAAGAGGATCCCCAGTCCAGAAGGGAACCAGCCCCTGCGAGAGTAGAGAAAATGTTTGAAGTTGTGAAGGCCCGACTTCCTGGCCCTCCAAAATTTCTGCTGTGCATCCTACCTGAGAGAAAGAACTCTGATATTTATGGTCCCTGGAAAAGGAAAAATCTCTCTGAAATGGGGATTGTAACTCAATGCATCGCACCAACAAAAGTCAATGATCAATACCTCACAAATGTGCTTCTTAAAGTCAATGCTAAGCTTGGTGGGATGAACTCTTTTCTTACTGTTGAGCCCAATCTACCATTAGTCTCAAAGCGCCCCACTTTGATTCTGGGTTTAGATGTCTCACATGGGTCACCGGGCCGATCAGATGTCCCATCTATTGCTGCGGTGGTTAGTTCAAGGTGCTGGCCTTTGATCTCCAAGTATAGGGCTGAAGTTCGCACACAGTCACCTAAAGTTGAGATGATTGCTTCTCTATTCAAACCTGTTTCCGACACTACGGATGAAGGGATTATCAGGGAACTGCTACTGGACTTTTATAGCACATCTCAACAAAGGAAGCCAGAACAAATTATCATTTTCAGGGATGGCGTTAGCGAATCGCAGTTCAATCAAGTGCTGAACATTGAACTTGACCAGATAATTGAGGCCTGCAAATTCCTTGATGCCAGTTGGACTCCTAAATTCACTTTGATTGTAGCACAGAAGAATCATCACACTAAGTTTTTCCAGGCCAACTCTCCTGACAATGTTCCTCCTGGAACCATCATTGATAATAGTGTATGCCATCCAAAGAACAATGATTTCTACTTATGTGCTCATGCTGGAATGATTGGAACAACTCGCCCGACTCATTACCATGTGCTATACGATGAGCTTTCTTTTTCAGCTGATGACTTGCAAGAGCTGGTGCATTCATTATCCTATGTGTACCAGAGGAGTACCACAGCAATTTCAGTTGTTGCACCAATTTGCTATGCCCACCTTGCCGCCTCTCAAATGTCACAATTCATCAAGTTTGATGACCTGTCTGAAACTTGTTCCAGCCATGGTGGACTTACAGCAGCTGGTGCTATCCAAGTGCCTGAACTGCCCAAGCTTCATGAGAATGTTTGCAACTCCATGTTTTTTTGTTGA 2727 0.4496 MDSPNPERHEREESLPAPPTTIPPDVVPAVIDYVKSESPKKAFTPKRSPVARRGLGTKGNKINLYTNHFKVGVSKTDGFFYHYSVALFYEDKTAVEAKGIGRKVMDKVYETYKSDLANKEFAYDGEKSLFTVGPLPNNKLEFTVVLDDLSSNKVGRNGSPGGSPSEADKKRLRRQGHSKTFSVEISYAARIPMQAIADALRGKESDYFQEAVRVLDIILRQNAAKQGCLLVRQSFFHNKPGNFTDLGGGVQGCRGFHSSFKATQDGLSLNIDVSTTMIVKPGPVIDFLLSNQNVKHPDHIDWTRAKKMLKNLRIKANNIEYKITGLSDRSCREQTFSLRQRSEGDEKAVDITVCEYFHSVKNIELQYSADMPCINVGKPKRPSYFPIELCTLVSLQRYTKALTSIQRASLVEKSRQKPQERMKALSDSLRDSAYGSDPMLKQSGISINVQFPQVQGRVLQAPKLRVGNGEDFFPRNGRWNFNNKKLVEPVKIERWAIVNFSARCDMRNLVNQMIRSGESKGILVESPFTVFEEDPQSRREPAPARVEKMFEVVKARLPGPPKFLLCILPERKNSDIYGPWKRKNLSEMGIVTQCIAPTKVNDQYLTNVLLKVNAKLGGMNSFLTVEPNLPLVSKRPTLILGLDVSHGSPGRSDVPSIAAVVSSRCWPLISKYRAEVRTQSPKVEMIASLFKPVSDTTDEGIIRELLLDFYSTSQQRKPEQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDASWTPKFTLIVAQKNHHTKFFQANSPDNVPPGTIIDNSVCHPKNNDFYLCAHAGMIGTTRPTHYHVLYDELSFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQMSQFIKFDDLSETCSSHGGLTAAGAIQVPELPKLHENVCNSMFFC* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00432 908 Gene3D - 458 624 - -
Pte6g00432 908 Pfam Argonaute linker 2 domain 420 465 IPR032472 -
Pte6g00432 908 MobiDBLite consensus disorder prediction 1 15 - -
Pte6g00432 908 CDD Piwi_ago-like 438 861 IPR045246 -
Pte6g00432 908 SMART DUF1785_2 229 281 IPR014811 -
Pte6g00432 908 ProSiteProfiles PAZ domain profile. 321 394 IPR003100 GO:0005515
Pte6g00432 908 Pfam PAZ domain 285 409 IPR003100 GO:0005515
Pte6g00432 908 SUPERFAMILY Ribonuclease H-like 547 867 IPR012337 -
Pte6g00432 908 SUPERFAMILY PAZ domain 276 431 IPR036085 GO:0005515
Pte6g00432 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 45 871 - -
Pte6g00432 908 Pfam Piwi domain 564 869 IPR003165 GO:0003676
Pte6g00432 908 SMART Piwi_a_2 563 869 IPR003165 GO:0003676
Pte6g00432 908 Pfam N-terminal domain of argonaute 61 219 IPR032474 -
Pte6g00432 908 Pfam Argonaute linker 1 domain 231 279 IPR014811 -
Pte6g00432 908 MobiDBLite consensus disorder prediction 153 177 - -
Pte6g00432 908 Gene3D paz domain 275 398 - -
Pte6g00432 908 CDD PAZ_argonaute_like 281 393 - -
Pte6g00432 908 FunFam Protein argonaute 7 276 398 - -
Pte6g00432 908 Gene3D - 628 908 IPR036397 GO:0003676
Pte6g00432 908 FunFam Protein argonaute 3 629 908 - -
Pte6g00432 908 MobiDBLite consensus disorder prediction 1 25 - -
Pte6g00432 908 ProSiteProfiles Piwi domain profile. 563 869 IPR003165 GO:0003676
Pte6g00432 908 Pfam Mid domain of argonaute 474 526 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00432 Pte-Chr6 5099014 5104055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00432 19 909 Eukaryotic Initiation Factors Gene Family AT1G48410 35.079 1.47e-170 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00432 K11593 - pop:7486850 1378.23