Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00417 ATGGATTCGGGAAACTCAATGGAGAATCTGCCACATTTGCCTACTCATAATTCCTCATCAAGAAGGACTAAATTGTCCAATCTGTCCAGGACCTCTGGTGAAAATTCTGCAGGAGAAGTGAATTTTGGTGATTTAGAATCAAAACCTGAGAGATACGGATCAAGGCCTCCTGATTCTGAAGCACTTAGCATGTCAGTGAAAGAAATTGACGAAGAAAATGCCAGGTTGATATATATCAATGATCCTGTTACAACGAATGAGAGATTTCAGTTTGTAGGGAATGGAATTCAGACGACCAAGTACTCTGTCTGGACCTTTGTGCCTAAAAATCTTTTTGAACAGTTTCATAGAGTTGCTTACATTTATTTCCTTATAATAGCTGTGCTTAATCAGTTGCCTCAGCTTGCTGTGTTTGGTAGAGGAGTTTCTATATTGCCTTTAGCTTTTGTTCTGTTAGTTACAGCTATCAAAGATGCATATGAGAATTATAGGCGGCATAGGTCAGATAGAGTTGAGAACAACAGGTTGGCAATGGTTTTGGACAATGATCAGTTTCAACAGAAGAAATGGAGGGATATTAGAGTTGGTGAAATCATCAAAATTCATGCAAATGAAACCATTCCTTGTGACATAGTTTTGCTTTCAACTAGTGATCCAACTGGAGTAGCTTATGTGCAGACTATTAATTTAGATGGAGAGTCCAACCTGAAGACTCGGTACTCAAAACAAGAAACTCTTGCCAAGCTTCCAGGAACTGATAGAATCAGTGGAGAAATTAAGTGTGAGAATCCGAATAGGAATATATACGGGTTTCAAGCATTCATGGAAATGGACGGCAAACGGCTATCACTCGGACCTTCTAATATTATTCTTAGAGGCTGTGAAATCAAGAACACTAGTTGGGCCCTGGGAGTGGCTGTCTATGCTGGAAGTGAGACTAAAGTTATGCTCAACAGCTCAGGAGCTCCTTCGAAGAGGAGCCGTCTTGAAACTCACATGAACACCGAGATCATAATGCTATCAGTGTTTCTTGTGGCTTTATGTACTGTTGTCTCTGTATGTGCTGCTGTTTGGTTAAGGCACAATAATGATGTACTAGATACCATGCCTTTTTACAGGAAGGTCAGCTTCTCTGAAGGAGAAGAGGAAAGCTACAACTATAATGGAAGGGGAGTAGAAATCTTTTTCACATTCCTCATGTCTGTTATAGTTTTCCAGGTCATGATACCGATATCACTGTATGTTTCCTTAGAGCTCGTCCGACTTTATCAGGCATATCTTATGAGTCTAGATGCCAAAATGTATGATGAGGCTTCAAATTCAAGATTGAAATGCAGGGCTTTGAACATCAACGAAGATTTAGGCCAAATTAAATATGTTTTCTCTGATAAAACTGGTACTCTCACTGAGAACAAGATGGTGTTTCAGTGTGCAAGCATTTGGGGTGTAAACTATGATGACGTGAAAGCCAGTCCTGAACCTGGGGAAGTTCAACATCATGTCGAAGTGGACGGGAAGGTTTTACAACCAAGAATGAAAGTGAAAGTTGATCCGGCGCTTTTTCGGTTGACAAGAAGTGGATTTGACAAGAGAGAAGCAAGATATGTTTATAACTTTTTCTTGGCATTGGCAACTTGCAACACAATTATCCCTATTTTCATTGACTCATCTGATCCCAAAATCAAGTTAATTGATTACCAGGGAGAGTCCCCAGATGAACAATCGTTGGTTTATGCCGCCGCGGCCTATGGATTTGTCCTTGTAGAAAGAACCTCAGACCATATAGTTATTGATGTTCTAGGAGAAAAGATAAGGTTCAACGTTTTGGGTTTGCATGAATTTGATAGCGAACGGAAGAGGATGTCAGTAATACTAGGTTGCCCTGATAACAGTGTAATAGCTTTTGTCAAAGGTGCTGACGCAGCTATGTTTGATGTGAGGCATAGATCCATTGCCGTGGACATAATTCAAGCAACTGAAGGCCACCTCCACAACTATTCATCACTGGGTTTGAGGACCCTTGTCATTGGGATGAGAGAACTGAATGATTTGGAGCTTGGGGAATGGCAGCCTGCCTTTGAGGCAGCAAGCACTGCTTTGTATGGTAGGGCTTCTTTGCTTCGCAAGGTGGCTGTAAATTTAGAAAAAAGTCTAACCATATTGGGTGCCACTGCTATTGAAGATAGGCTGCAAAAAGGGGTGCCAGAATCAATTGAGTCTCTCAGGACTGCAGGGGTTAAGGTGTGGGTATTGACTGGGGACAAACAAGAAACTGCCACAGCGATTGGCTACTCCTCAAAGCTTCTGACAAGAAAGATGACACAGATTATAATTAATAGTAAAAACAAGGAATCATGTAGAAGGAGTTTAGAAGATGCCCTGGCTATGACAAGGAAAAGTAAGAGTGTGCCTGCACTTCCAGAGGATAACAGAATAGGTGGTGAGGAAAATAAATTGAACACAACTTCAATAGCGTTGATCGTTGATGGTACCAGTCTCGTGTATCTTCTTGACAATGAATTTGAAGATGAACTCTTCCATCTAGCAAGTAATTGTTCAGTGGTTCTGTGTTGCCGAGTAGCTCCATTGCAAAAGGCTGGAATTGTGGCTCTTGTAAAGCGCAGGACTTCTGACCTCACACTTGCCATTGGAGATGGTGCTAATGACGTTTCCATGATCCAAACGGCTGATGTTGGAGTCGGTATCAGTGGTCAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCACTGGGGCAGTTCAGGTTCTTAGTACCCCTTCTATTGGCACATGGGCATTGGAACTACCAGAGGCTGGGTTATATGATACTATACAATTTCTACAGGAATGCACTGCTTGTTCTTGTCTTCTTTTGGTATGTGCTTTTCACTTGCTTCACCTTGACAACTGCAGTCAATGAATGGAGCAGCATGTTGTATTCTGTAATCTATACTTCTCTGCCAACAGTAGTTGTGGGCATTCTGGACAAAGACCTTAGGAGAAGCACACTCTTAAAGTACCCTCAGCTTTATGGGTCAGGTCATAGAAAGGAATGTTACAATAAAAAGTTATTTTGGTTGACAATGCTAGATACGTTGTGGCAAAGCATTGTCGCCTTCTTTGTGCCTCTCTTTGCTTATTGGGCAAGCGACGTGGATGTTACAAGCATAGGGGATCTATGGACTCTGGCAGTGGTTTTTTTGGTTAACTTACATTTGGCCATGGATGTGATAAGATGGAACTGGATTTTTCATGCAGCCATTTGGGGATCTATACTTGCTACTTTCATTTGTGTTATGGTCATTGACGCCTTGCCCATATTTCCTGGTTACTGGTCCATCTTTCATAATTCCACAAGAGGATCATTTTGGTTATGCTTGCTCGTAATCGTGGTGGCAGCATTGGTCCCTCGTTTTGTTGTGAAATTCCTTTATCAATATTATATTCCTAGTGATGTTAGGATTGCTAGAGAAATAGAGAAATATGGAAGTACCAGGGATTCTGAAACTGGACAAATAGCTATAGAGATGGATCCCTTGTCAGATCTTCCACGGAGATGA 3561 0.4156 MDSGNSMENLPHLPTHNSSSRRTKLSNLSRTSGENSAGEVNFGDLESKPERYGSRPPDSEALSMSVKEIDEENARLIYINDPVTTNERFQFVGNGIQTTKYSVWTFVPKNLFEQFHRVAYIYFLIIAVLNQLPQLAVFGRGVSILPLAFVLLVTAIKDAYENYRRHRSDRVENNRLAMVLDNDQFQQKKWRDIRVGEIIKIHANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYSKQETLAKLPGTDRISGEIKCENPNRNIYGFQAFMEMDGKRLSLGPSNIILRGCEIKNTSWALGVAVYAGSETKVMLNSSGAPSKRSRLETHMNTEIIMLSVFLVALCTVVSVCAAVWLRHNNDVLDTMPFYRKVSFSEGEEESYNYNGRGVEIFFTFLMSVIVFQVMIPISLYVSLELVRLYQAYLMSLDAKMYDEASNSRLKCRALNINEDLGQIKYVFSDKTGTLTENKMVFQCASIWGVNYDDVKASPEPGEVQHHVEVDGKVLQPRMKVKVDPALFRLTRSGFDKREARYVYNFFLALATCNTIIPIFIDSSDPKIKLIDYQGESPDEQSLVYAAAAYGFVLVERTSDHIVIDVLGEKIRFNVLGLHEFDSERKRMSVILGCPDNSVIAFVKGADAAMFDVRHRSIAVDIIQATEGHLHNYSSLGLRTLVIGMRELNDLELGEWQPAFEAASTALYGRASLLRKVAVNLEKSLTILGATAIEDRLQKGVPESIESLRTAGVKVWVLTGDKQETATAIGYSSKLLTRKMTQIIINSKNKESCRRSLEDALAMTRKSKSVPALPEDNRIGGEENKLNTTSIALIVDGTSLVYLLDNEFEDELFHLASNCSVVLCCRVAPLQKAGIVALVKRRTSDLTLAIGDGANDVSMIQTADVGVGISGQEGRQAVMASDFALGQFRFLVPLLLAHGHWNYQRLGYMILYNFYRNALLVLVFFWYVLFTCFTLTTAVNEWSSMLYSVIYTSLPTVVVGILDKDLRRSTLLKYPQLYGSGHRKECYNKKLFWLTMLDTLWQSIVAFFVPLFAYWASDVDVTSIGDLWTLAVVFLVNLHLAMDVIRWNWIFHAAIWGSILATFICVMVIDALPIFPGYWSIFHNSTRGSFWLCLLVIVVAALVPRFVVKFLYQYYIPSDVRIAREIEKYGSTRDSETGQIAIEMDPLSDLPRR* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00417 1186 SFLD Haloacid Dehalogenase 445 934 - -
Pte6g00417 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 1150 IPR023298 -
Pte6g00417 1186 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Pte6g00417 1186 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Pte6g00417 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 467 733 IPR023299 GO:0000166
Pte6g00417 1186 SUPERFAMILY Calcium ATPase, transduction domain A 174 316 IPR008250 -
Pte6g00417 1186 Pfam Phospholipid-translocating ATPase N-terminal 77 142 IPR032631 -
Pte6g00417 1186 FunFam Phospholipid-transporting ATPase 717 923 - -
Pte6g00417 1186 FunFam Phospholipid-transporting ATPase 565 698 - -
Pte6g00417 1186 NCBIfam phospholipid-translocating P-type ATPase 91 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte6g00417 1186 Gene3D - 717 923 IPR023214 -
Pte6g00417 1186 Gene3D - 148 318 - -
Pte6g00417 1186 CDD P-type_ATPase_APLT_Dnf-like 93 1043 - -
Pte6g00417 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 463 469 IPR018303 -
Pte6g00417 1186 Pfam E1-E2 ATPase 177 416 - -
Pte6g00417 1186 MobiDBLite consensus disorder prediction 1 38 - -
Pte6g00417 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 69 1161 - -
Pte6g00417 1186 FunFam Phospholipid-transporting ATPase 149 318 - -
Pte6g00417 1186 Pfam Cation transport ATPase (P-type) 570 643 - -
Pte6g00417 1186 SFLD p-type atpase 445 934 IPR044492 -
Pte6g00417 1186 MobiDBLite consensus disorder prediction 1 62 - -
Pte6g00417 1186 NCBIfam HAD-IC family P-type ATPase 854 970 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00417 1186 SUPERFAMILY HAD-like 448 924 IPR036412 -
Pte6g00417 1186 Gene3D - 563 697 IPR023299 GO:0000166
Pte6g00417 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 911 1150 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00417 Pte-Chr6 4916100 4922469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00417 1 1187 Primary Pumps ATPases AT5G04930 67.114 0.0 1648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00417 K14802 - tcc:18586933 1753.8