LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte6g00405	ATGAAGATCACACTTATGTTGATATTTGTTCTGGGGTTGATTGCAATTGTACTTCTCATCATTCTCATACTTTACATGTTTGTTTTCCGCAAAAGGGTCATAGTGATCAGTACAAAAGATATAGAGACCACTGAGCAGAAACATGAAGATGGGATGGTGCAGGCAGAGGATTTGATCACTTTCAAAAGTGGGGAAGACCTCAGAATCTGTGATATTCTGGATGCTCCTGGTGAAGTCATAGGAAAATCTCATTATGGTACATTGTACAAGGCCTTGTTACAAAGAAGCAGTACCATTAGGCTATTGAGGTTTCTAAGACCAGTGTGTACAACTAGAGCGGAGGAATTTCATGACGTGATTCACTTGCTGGGATCCATAAGGCATCAGAATTTGGTGCCTCTTCTGGGATTCTATGGAGGACCAAGAGGGGAGAAGCTTCTTATTCATCCATTTTATAGGCATGAAAACCTGGCGCAGTTCTTAAGAGATGAAAATGGGGAGTCTCACAAATGGTCTACCATTTATAGAATCTCCACTGGTATAGCAAAAGGATTGGAGTATCTTCACACTGGACTCGAGAAACCCGTCATCCATGGAAATCTGAAATCAAAAAATGTGTTTTTGGATCAAAACCGCCAGCCTTATGTTTCCGATTTTGGCATACATCTTATGTTGACAGCAACTGCAGGACAAGAAATGCTTGAAGCCTCAGCAGCAGAAGGTTACAAAGCACCTGAGCATATCAAAATGAAGGATGCAAGTGAGGAGACTGACATATACAGTCTTGGAGTAATCCTTCTTGAATTGCTGTCTGGGAAAGAACCTGTAAATGAAAATGCAACTTCTGATCAAGATGTTTACTTGCCAAACCTGATGAGGAATTTGGTTCTCGGACATAGAATCTCTGATATGTTTGTTGCAGACATTGTTCATAGCAGTAGCAACGATGAAAGTCCAGTTACAGAAGAGGGTATTCTCAAATTCTTTCAGCTTGCAATGGCTTGTTGCTCTCCTTCTCCATCACTTAGACCCAACATTAAGCAAGTTCTGTGGAAGCTTGAACAAATCATAAAATGA	1077	0.4067	MKITLMLIFVLGLIAIVLLIILILYMFVFRKRVIVISTKDIETTEQKHEDGMVQAEDLITFKSGEDLRICDILDAPGEVIGKSHYGTLYKALLQRSSTIRLLRFLRPVCTTRAEEFHDVIHLLGSIRHQNLVPLLGFYGGPRGEKLLIHPFYRHENLAQFLRDENGESHKWSTIYRISTGIAKGLEYLHTGLEKPVIHGNLKSKNVFLDQNRQPYVSDFGIHLMLTATAGQEMLEASAAEGYKAPEHIKMKDASEETDIYSLGVILLELLSGKEPVNENATSDQDVYLPNLMRNLVLGHRISDMFVADIVHSSSNDESPVTEEGILKFFQLAMACCSPSPSLRPNIKQVLWKLEQIIK*	359

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte6g00405	358	SUPERFAMILY	Protein kinase-like (PK-like)	77	355	IPR011009	-
Pte6g00405	358	ProSiteProfiles	Protein kinase domain profile.	74	357	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte6g00405	358	Pfam	Protein tyrosine and serine/threonine kinase	77	350	IPR001245	GO:0004672\|GO:0006468
Pte6g00405	358	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED	5	356	-	-
Pte6g00405	358	Gene3D	Phosphorylase Kinase; domain 1	35	151	-	-
Pte6g00405	358	Gene3D	Transferase(Phosphotransferase) domain 1	153	358	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte6g00405	Pte-Chr6	4618280	4621155	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte6g00405	40	359	Carbohydrate Esterase	AT5G61570	58.589	7.05e-132	379

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Pte6g00405		PK_Tyr_Ser-Thr	1.7e-30	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte6g00405	-		-	qsa:O6P43_001620	515.383

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