Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00405 ATGAAGATCACACTTATGTTGATATTTGTTCTGGGGTTGATTGCAATTGTACTTCTCATCATTCTCATACTTTACATGTTTGTTTTCCGCAAAAGGGTCATAGTGATCAGTACAAAAGATATAGAGACCACTGAGCAGAAACATGAAGATGGGATGGTGCAGGCAGAGGATTTGATCACTTTCAAAAGTGGGGAAGACCTCAGAATCTGTGATATTCTGGATGCTCCTGGTGAAGTCATAGGAAAATCTCATTATGGTACATTGTACAAGGCCTTGTTACAAAGAAGCAGTACCATTAGGCTATTGAGGTTTCTAAGACCAGTGTGTACAACTAGAGCGGAGGAATTTCATGACGTGATTCACTTGCTGGGATCCATAAGGCATCAGAATTTGGTGCCTCTTCTGGGATTCTATGGAGGACCAAGAGGGGAGAAGCTTCTTATTCATCCATTTTATAGGCATGAAAACCTGGCGCAGTTCTTAAGAGATGAAAATGGGGAGTCTCACAAATGGTCTACCATTTATAGAATCTCCACTGGTATAGCAAAAGGATTGGAGTATCTTCACACTGGACTCGAGAAACCCGTCATCCATGGAAATCTGAAATCAAAAAATGTGTTTTTGGATCAAAACCGCCAGCCTTATGTTTCCGATTTTGGCATACATCTTATGTTGACAGCAACTGCAGGACAAGAAATGCTTGAAGCCTCAGCAGCAGAAGGTTACAAAGCACCTGAGCATATCAAAATGAAGGATGCAAGTGAGGAGACTGACATATACAGTCTTGGAGTAATCCTTCTTGAATTGCTGTCTGGGAAAGAACCTGTAAATGAAAATGCAACTTCTGATCAAGATGTTTACTTGCCAAACCTGATGAGGAATTTGGTTCTCGGACATAGAATCTCTGATATGTTTGTTGCAGACATTGTTCATAGCAGTAGCAACGATGAAAGTCCAGTTACAGAAGAGGGTATTCTCAAATTCTTTCAGCTTGCAATGGCTTGTTGCTCTCCTTCTCCATCACTTAGACCCAACATTAAGCAAGTTCTGTGGAAGCTTGAACAAATCATAAAATGA 1077 0.4067 MKITLMLIFVLGLIAIVLLIILILYMFVFRKRVIVISTKDIETTEQKHEDGMVQAEDLITFKSGEDLRICDILDAPGEVIGKSHYGTLYKALLQRSSTIRLLRFLRPVCTTRAEEFHDVIHLLGSIRHQNLVPLLGFYGGPRGEKLLIHPFYRHENLAQFLRDENGESHKWSTIYRISTGIAKGLEYLHTGLEKPVIHGNLKSKNVFLDQNRQPYVSDFGIHLMLTATAGQEMLEASAAEGYKAPEHIKMKDASEETDIYSLGVILLELLSGKEPVNENATSDQDVYLPNLMRNLVLGHRISDMFVADIVHSSSNDESPVTEEGILKFFQLAMACCSPSPSLRPNIKQVLWKLEQIIK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00405 358 SUPERFAMILY Protein kinase-like (PK-like) 77 355 IPR011009 -
Pte6g00405 358 ProSiteProfiles Protein kinase domain profile. 74 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00405 358 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
Pte6g00405 358 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 356 - -
Pte6g00405 358 Gene3D Phosphorylase Kinase; domain 1 35 151 - -
Pte6g00405 358 Gene3D Transferase(Phosphotransferase) domain 1 153 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00405 Pte-Chr6 4618280 4621155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00405 40 359 Carbohydrate Esterase AT5G61570 58.589 7.05e-132 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte6g00405 PK_Tyr_Ser-Thr 1.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00405 - - qsa:O6P43_001620 515.383