Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00401 ATGGCAGCCAATGTTGAGACTGTTTTCAAAGAAACCATCAAACCATCATGTTCAACACCAAAGCATCTCAGACATTTGAAGCTATCTTTCTTTGATCAGTTTGCACCAATAAAATATTCCTCTGTGCTTCTCTTCTACCCTAATGGCAATGACGCTGCAGATCACAGTCAGGAGATTGCCAACAAGATTCAGTTGCTCAAGACATCATTATCTCAAATTCTCACTCACTACTATCCTCTTGCAGGTAGAATCAAGGATAACACAGTGATTGAATGTGATGATTATGGGGTAGAGTTTGTTGAGGCCAGAGTCAACTGCCTTCTCTCAGACATATTGAAAGTACCTGATGCCTTGCCTGCAAGTAAGTTTTTGCCTCAGGAAGTCTGGTCCTCACAGGCAGCCACAGGGCCCTTGTTAGCTGTCCAAACAACCTTCTTCGCATGTGGGGGTTTGGTAATCGCTGTCTGCATTTCACATAAGATAGCTGATGCTTCTACGGTAAGTAAATTCATCCAAGCCTGGTCAGCAACCGCACAGGGAAAGATGAATGAGGATATGCGTCCTGCCTTTCTTCTTGGATCTCTATATCCAGCAAAGGACTTCCTCTCTACTTTTCGACCATCTGTAGATAAGAAGAAATCTAAATTCACGATAAGAAGGTATATCTTTGAGGAGTCTAAGCTGGCCAAGCTCAAGACTGAAGCAGCCAGTGACACTGTGCATTATCCATCGCGTGTCGAAGCATTGACAGCACTCGTGTGGAAATGTTTGATGAAAGCTTCAAGATTAACCTCTGGTCACGCTAGACAAGTAATGATATGCCAAAATGTGAACAATCGAAAGAGGCATGTTCCTCCTCTGCCTGACAACGCTTTTGGCAATTTCATAGGCTACTTTACAGCACATGCTGAGAGTGATTGCGAGACAGATTTGAAAAACCTTGTGATTGTGTTAAGGAAAGGGTTAGAAGATTACATACAGACTAACAAAAAAATCCATGAAGGTGACGCGTTCCAAGCCATTTGTGAATATGGAATGAAGATAAGCAGCCTTCAGAAAGAAAAGGATGGAGATGTATACACGGTCAGCAGCGTGTGCAAGTTTCCATTTTATGAGGCTGATCTTGGATGGGGTAAGCCCAAGTGGGTGACTATTCCTGTTGCAGAACAAGCTCAGAATTCCATTTACATGGTGGATTCAGTTGAAGGGAAAGGCATAGAAATATGGTTGACTTCTAATGAAGAATATATGGCCTCTCTAGATTGCAATAAAGAGCTCCTAGAATATGCTGCTTCCGCCAAGAGCATATTTGTCTGA 1317 0.4267 MAANVETVFKETIKPSCSTPKHLRHLKLSFFDQFAPIKYSSVLLFYPNGNDAADHSQEIANKIQLLKTSLSQILTHYYPLAGRIKDNTVIECDDYGVEFVEARVNCLLSDILKVPDALPASKFLPQEVWSSQAATGPLLAVQTTFFACGGLVIAVCISHKIADASTVSKFIQAWSATAQGKMNEDMRPAFLLGSLYPAKDFLSTFRPSVDKKKSKFTIRRYIFEESKLAKLKTEAASDTVHYPSRVEALTALVWKCLMKASRLTSGHARQVMICQNVNNRKRHVPPLPDNAFGNFIGYFTAHAESDCETDLKNLVIVLRKGLEDYIQTNKKIHEGDAFQAICEYGMKISSLQKEKDGDVYTVSSVCKFPFYEADLGWGKPKWVTIPVAEQAQNSIYMVDSVEGKGIEIWLTSNEEYMASLDCNKELLEYAASAKSIFV* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00401 438 PANTHER F21J9.9 6 430 - -
Pte6g00401 438 Gene3D - 1 203 IPR023213 -
Pte6g00401 438 Pfam Transferase family 4 426 - -
Pte6g00401 438 Gene3D - 214 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00401 Pte-Chr6 4572217 4573664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00401 13 380 Monolignol Biosynthesis Gene Families AT5G48930 27.041 1.16e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00401 - - qsa:O6P43_026947 397.127