Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00398 ATGCGTCAAAGAAGTCCACAACATGCACGTCGAAAGGGTAATGGATCCAGGCCATGGCGAGTGATAACAGAGTCAGGACATTCTCATCTTGAGCAGGTACGGAAGCATTCGCTAATGAGAAGGACTGGCTTGCACACACGTGATTTTCGACTACTGGATCCAGTATTATCATACTCTTCATCGATTCTGGGGCGAGAAAGAGCCATCGTTATCAACTTGGAGCACATCAAGGCCATTGTTACTGCAAAAGAAGTTTTCTTGGTCAATTCTTCAAATCCTCTCATGGTTCAATTTGTTGAAGATCTTAAGAACCGGATAGTCGGTTCAAATGGTGCGCCTCGACCGCCGATGGAAAGGAACAAGGCGATATCTGAAACTGGTGTGGCTTTATCAGATGGTCACCAGGGTTCTACTCATCACAATTTCAGTAAACCAGAAACACTTGCTCCCAAGTTGTTACCTTTTGAGTTCCGAGTGCTCGAAGCTTGTCTCGAATCTGCATGCAGATGCCTTGAATCTGAGACGGAGACATTAGAAGAAGAGGCATATCCAGCTTTGGATGCGTTGACTTCCAAAATTAGTACACTTAATCTCGATCGTGTTCGACAAATCAAAAGTCGCCTAGTAGCAATTTCTGGTCGAGTACAGAAGGTGAGAGATGAGCTTGAACATCTACTGGACGACGACAACGACATGGCCGAAATGTACTTAACCGAGAAGCTTCGTACTTGCTCTACGGATCAGTTGTCGTCAAGAAAAGAAGTACAGAATGCTTTAGCTGGAATGAACAGTGGCGGTATTAACTTAGATTCACAGCAGGGCAATTTTTTCATTTTGATCAGATGGAAACTTATCAATATGGCATCAGGTTATCGTTTTGACATTTTAAAACTTAACTCCTTCTGTCATTTTGCTAGTGGAGTGGGTGATTCTGAAAACAATTCTGAGATTTCGGTCGCTCTTAAGACCATTAGTACTGAAGAACTTGAGATGCTTTTGGAAGCATATTTTGCACAGTTAGAAGGCATCTTGCGGAAGCTGTCTCATATGAACGAGTACGTAGGCGACACAGAAGACTACATCAACATTATGCTGGATGATAAGCAGAATCAGATGCTACAAATGTCTGTCATTCTCAATACTGCAAACATGATCCTCAATGCCGGTATTGTTGTTGTGGGGTTGTTTGGCATGAACATTCACATCTCACTCTTTGAAGCTCAGCCCATCAAGTTCTGGGAAGCAACATCCGGTACAATAGGAGGATGTGTCGCCTTATATCTCATCGCCGTTGGTTGGGGAAGGAAAAGATTTCTGCTCACTTGA 1326 0.4336 MRQRSPQHARRKGNGSRPWRVITESGHSHLEQVRKHSLMRRTGLHTRDFRLLDPVLSYSSSILGRERAIVINLEHIKAIVTAKEVFLVNSSNPLMVQFVEDLKNRIVGSNGAPRPPMERNKAISETGVALSDGHQGSTHHNFSKPETLAPKLLPFEFRVLEACLESACRCLESETETLEEEAYPALDALTSKISTLNLDRVRQIKSRLVAISGRVQKVRDELEHLLDDDNDMAEMYLTEKLRTCSTDQLSSRKEVQNALAGMNSGGINLDSQQGNFFILIRWKLINMASGYRFDILKLNSFCHFASGVGDSENNSEISVALKTISTEELEMLLEAYFAQLEGILRKLSHMNEYVGDTEDYINIMLDDKQNQMLQMSVILNTANMILNAGIVVVGLFGMNIHISLFEAQPIKFWEATSGTIGGCVALYLIAVGWGRKRFLLT* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00398 441 FunFam Magnesium transporter MRS2-1 7 90 - -
Pte6g00398 441 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 439 IPR039204 -
Pte6g00398 441 Coils Coil 161 181 - -
Pte6g00398 441 Gene3D - 5 91 - -
Pte6g00398 441 Gene3D Magnesium transport protein CorA, transmembrane region 95 372 - -
Pte6g00398 441 CDD Mrs2_Mfm1p-like 19 437 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00398 Pte-Chr6 4548771 4551340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00398 19 440 MRS2 Gene Family AT3G19640 49.330 7.42e-127 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00398 - - dcr:108225070 460.299