Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00376 ATGGACCTCAAGTCAAACAATACGTCTCCAGTACTCACCGATCCTGTACCCATGACAAACTCAAGATTGGGTGTGCATTCTGGCCTGTTGCCTTACTCGCCTACTGGGGCAGCCTATCCAGCTAGTCTTTTACTATCAATTCCAAGGAGGAAGACTATAGTACTTGATGATATTCGCGCTAGTAGCTGGTTAGATGCTATGAAAGCTTCGTCTCCTCCTCCTAGAAAGATAAGCAAGGATGTGACCAGAGAGTCGGAGTCCTCTGATGCTGATACTGCTTACAGCTCCTGGATGGTAAAATATCCATCAGCACTCTCATCTTTTGAGCAAATTACAAAGCATGCAAAAGATAAGAGAATAGCATTGTTTCTTGATTATGACGGCACACTTTCACCAATTGTGGACAACCCTGACTGTGCTTTCATGTCTGAAGCTATGCGCACTGCTGTGAAAAATGTGGCAAAATATTTCCCTACAGCAATAATTAGCGGAAGAAGCTGTGATAAGGTATATAAATTTGTAGGACTAACTGAACTTTATTATGCGGGAAGTCATGGGATGGATATCATTGGCCCTGTTAGACAGTCTGTATCTGACAACCGTGCAAACAGTATTAGATCTACTGACAAGCAGGGCAAGGAGGTAAATTTATTCCAACCTGCTGCTGAATTTTTACCCATGATTGAGGAGGTTTTAGGATTACTTGTTGAAAGGACAAAAGATATTGAAGGGGCAAAAATCGAGAACAACAAGTTTTGTGTCTCTGTACATTACCGCAATGTAGATGAAAAGAGTTGGAATACAGTGGCAAAACGGGTACATGATATTTTGAAGGAATATCCACGTTTGCGGTTGAGTCATGGACGCAAGGTTTTGGAGGTGAGGCCTGTAATTGACTGGGATAAGGGGAAGGCTGTAACGTTTTTGCTGGAATCACTTGGATTGGATAACTGCGACGATGTTCTTCCAATTTATGTTGGAGATGACCGGACTGATGAAGATGCATTCAAGGTATTACGAGAAGGAAACAAAGGTTATGGCATCTTGGTATCCTCTGTGCCTAAAGAGAGCAATGCGTTTTACTCTCTCCGTGATCCACCAGAGGTCTTGCTGTTCCTCAAGTCACTTGTTGCATGGAAGAAATCAAGTGCACTACAAATATTGTTTTAG 1170 0.4239 MDLKSNNTSPVLTDPVPMTNSRLGVHSGLLPYSPTGAAYPASLLLSIPRRKTIVLDDIRASSWLDAMKASSPPPRKISKDVTRESESSDADTAYSSWMVKYPSALSSFEQITKHAKDKRIALFLDYDGTLSPIVDNPDCAFMSEAMRTAVKNVAKYFPTAIISGRSCDKVYKFVGLTELYYAGSHGMDIIGPVRQSVSDNRANSIRSTDKQGKEVNLFQPAAEFLPMIEEVLGLLVERTKDIEGAKIENNKFCVSVHYRNVDEKSWNTVAKRVHDILKEYPRLRLSHGRKVLEVRPVIDWDKGKAVTFLLESLGLDNCDDVLPIYVGDDRTDEDAFKVLREGNKGYGILVSSVPKESNAFYSLRDPPEVLLFLKSLVAWKKSSALQILF* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00376 389 SUPERFAMILY HAD-like 121 379 IPR036412 -
Pte6g00376 389 Pfam Trehalose-phosphatase 123 366 IPR003337 GO:0003824|GO:0005992
Pte6g00376 389 NCBIfam HAD-IIB family hydrolase 122 340 IPR006379 -
Pte6g00376 389 NCBIfam trehalose-phosphatase 118 377 IPR003337 GO:0003824|GO:0005992
Pte6g00376 389 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
Pte6g00376 389 CDD HAD_TPP 121 369 - -
Pte6g00376 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 384 IPR044651 GO:0004805|GO:0005992
Pte6g00376 389 Gene3D - 120 214 IPR023214 -
Pte6g00376 389 Gene3D - 225 386 IPR023214 -
Pte6g00376 389 FunFam Trehalose 6-phosphate phosphatase 221 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00376 Pte-Chr6 3966681 3972140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00376 111 383 Trehalose Biosynthesis Gene Families AT1G23870 26.207 2.72e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00376 K01087 - qsa:O6P43_029896 631.328