Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00365 ATGGCTAAGAACAACCTGAACTCAACTACTTTATGCAACCATCAAACGGCAGGTATCATCAAGAGAATTCGATTGGAGAATTTCATGTGCCACAGCAATTTGGAGATTGAATTCGGTGAATGGGTCAATTTCATTACTGGTCAAAATGGAAGTGGAAAGAGTGCGATATTAACTGCGTTATGCGTTGCATTTGGATGTCGAGCTAGAGGGACGCAGAGAGCAACTACATTGAAGGATTTTATTAAAACTGGATGCAGTTCTGCAGTTGTTCACGTGGAAATACAAAATGAAGGGGAAGATGCTTTCAAGCCAGATATATATGGTGATCACATCATTGTAGAGCGTAGAATATCTGAAACTACAAGCTCTACTGTACTAAAAGATTATCAAGGGAAAAAAGTTGTTTCTCGGAAATCAGAACTTCTTGAGCTTGTGGAACATTTCAACATTGATGTCGAGAATCCATGTGTAATAATGAGTCAAGATAAAAGCAGGGAATTTTTACATTCTGGGAGTGAGAAGGAAAAATTCAAGTTCTATTTCAAGGCAACACTTCTGCAGCAAGTCAGCGATCTCCTGGAAGGTATTTCTAATAGTTTGGGGGAAGCAAATGCAGTTGTTGGAGAATTAGAGAGTGAAATAAGGCCCTTGGAAAAGGAACTAAATGAGTTACAGAACAAGATAAAAAACATGGAGCATGTAGAGCAAATTGCTCAGCAAGTTCAGCACTTAAGGAAGAAACTTGCATGGTCATGGGTGTACCATGTAGACAACCAACTTCAGGAACAAAGAGTAAAAATTGATAAGCTAAAGGATCGCATACCTACTTGCCAAGCAAGAATTGATCACCAGAAGAGCTTACTGGAAGGATTAAAAGAACGCGCCACCAAGAAAAAGGTTCAGATCACATGCATGATGGAAAAGACTGCAGAAGTTAGGAGATTGAAGGATGAACTGCAGAAAAAAATCTCCCTGGCCACAAAAGAAAAGCGAGAACTAGAAGAAGAATGCAGCCGTGGAACTAGTGATATTGAGAATCTGGTAAAGCGTGTCGGGATACTTGAACTGCAGATTCAGGATATTCATGAAAAACATGCACAAAATACTCAGGCCAATGAATTTGAGAGGGAGAAGATACTGAAACAACTAGAAAATGAGGTTGATGATTTAAAATTGGATATAAGGAGGTTAAAGGAAGAAGAGAACACCTTATCAGAAAGCCTGCAACAGCTAAGGAATGAAGTTAGAAATCTACTCAATGAGATTGATATTTACGGAAAGAGGCGATATGAAATTGATCACTCCATTCGTAAACTTAAAGGCCTTCAAAGCAATAAGGTGTCAGCCTTTGGAGGGGATAGAGTGCATAATTTACTACAGAGAATTGAGCATCGCTGTGAGTTGTTTCAGATCCCACCTATTGGTCCAATTGGTGCTCATCTGAGACTGAAAGATGGTGATACATGGGCATATGCAGTAGAGAATGCTATTGGAAAATTCTTCAATGCTTTTATAGTGACAAGCCATAAAGATTCCCTTCTTTTGAGACAATGTGCAAGAGAGGCAAACTGTGAAAATCTTCAAATTGTGATATATGACTTTTCCAGAAAGAGGCTGGTTATACCTAATCACTTACTTCCGAACACCAACCATCCATCTACTCTGTCAGTTATACATTCAGATAATGACACAGTCATAAATGTCTTGGTGGATATGGGAAGTGCTGAAAGACAAGTGCTTGTGAAGGATTATGATTCTGGTAAAAAGGTTGCTTTTGACCCTCAAATCTTAAATGTCAGGGAGGTCCACACAATGGATGGTTACAAGATGTTTTCTCGTGGTTCAGTGCAAACTATTCTTCCTCCTAATAAGAGGCAGAGGACTGCCCGCCTACGTAGTTCCTATGATGATCAAATACAAGCTCTTGAAGAGGAGGCGTCTCTTATACCAGAAGCTGTTAGTAAATGTCACAATCTGAAAAGGATTGCAGAGAAAAATATTGAGGAAATTGAAGGGAACCTGACTCGTGTAAAAAGACTTTGTCGGGATGCTGAGAGGAAGTTGTCTTCCAAAAACCTTGAGGTGCTAGATACACAGAAATTTGATGAAGAACCCTCATCTGCATCTACTGTCGATGAGCTCCGTCAAGAAATATCAAAACTGCAACAATGTATACAAGAAAAGGAGACCTTGCAGGAAAGGGTTCAAGTTAGAATGCATAAAGCAGCTGCCATCGCAAATGATCTTAAAATGTCATTCAAGGAACTATGTGATTCTGCACAAGGTGAGATTGATGCTTTTGAGAAAGCAGACCGCGAGTTAATGCAGATAGAACAAGAGATGCAGTCGGCAGACGCGGAGAAGGCTCATTATGAAGGTGTCATGAACAATAAGGTCATGCATGACATCAAGGTGGCAGAAGGTCAATACCAGGATCTTCAGCATAATCGGGAGGAAAACAGCAAAAAGGCTTCTATTATATGTCCTGAGAGTGACCTTGAATCTATAGGAGGTTGGGATGGGAGCAACCCAGATCAATTAAGTGCTCAATTAAATAGACTAAGCCAGAGGCTTCAACAAGAGAGCTATAGATATTCTGATTCAATTGATGATCTCAGAATGTTATATGCAGACAAGGAAAGAAAAATTTCAAGGAAACAGCAAACTTATAAAGCTTTTCAGGAAAAGTTGGATGCTTGCCATAAAGCCCTACAGTTACGGTGGGGTAAGTTTCATAGAAATGCAAGTCTTCTAAAGCGGCAGTTAACTTGGCAATTTAATGGGCATTTGGGAAAGAAAGGAATCAGTGGGCACATCAAAATTAACTATGAGGAAAAAACTCTTTCGGTTGAGGTAAAGATGCCCCAAGATGCATCAAATAGCACTGTTCAAGACACACGGGGGCTGTCAGGCGGGGAACGCTCTTTCTCGACTTTGTGCTTTGCGTTAGCCCTTCATGAAATGACAGAAGCCCCGTTCAGAGCAATGGATGAATTTGATGTGTTCATGGATGCAGTTAGTCGAAAAATCAGCTTAGATACAGTAGTGGATTTTGCAGAGGCACAAGGATCCCAGTGGATATTTATTACTCCTCATGACATAAGCATGGTCAGACAAGGTGACAGGATCAAGAAGCAGCAAATGGCAGCTCCTCGTACCTAA 3162 0.4035 MAKNNLNSTTLCNHQTAGIIKRIRLENFMCHSNLEIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRATTLKDFIKTGCSSAVVHVEIQNEGEDAFKPDIYGDHIIVERRISETTSSTVLKDYQGKKVVSRKSELLELVEHFNIDVENPCVIMSQDKSREFLHSGSEKEKFKFYFKATLLQQVSDLLEGISNSLGEANAVVGELESEIRPLEKELNELQNKIKNMEHVEQIAQQVQHLRKKLAWSWVYHVDNQLQEQRVKIDKLKDRIPTCQARIDHQKSLLEGLKERATKKKVQITCMMEKTAEVRRLKDELQKKISLATKEKRELEEECSRGTSDIENLVKRVGILELQIQDIHEKHAQNTQANEFEREKILKQLENEVDDLKLDIRRLKEEENTLSESLQQLRNEVRNLLNEIDIYGKRRYEIDHSIRKLKGLQSNKVSAFGGDRVHNLLQRIEHRCELFQIPPIGPIGAHLRLKDGDTWAYAVENAIGKFFNAFIVTSHKDSLLLRQCAREANCENLQIVIYDFSRKRLVIPNHLLPNTNHPSTLSVIHSDNDTVINVLVDMGSAERQVLVKDYDSGKKVAFDPQILNVREVHTMDGYKMFSRGSVQTILPPNKRQRTARLRSSYDDQIQALEEEASLIPEAVSKCHNLKRIAEKNIEEIEGNLTRVKRLCRDAERKLSSKNLEVLDTQKFDEEPSSASTVDELRQEISKLQQCIQEKETLQERVQVRMHKAAAIANDLKMSFKELCDSAQGEIDAFEKADRELMQIEQEMQSADAEKAHYEGVMNNKVMHDIKVAEGQYQDLQHNREENSKKASIICPESDLESIGGWDGSNPDQLSAQLNRLSQRLQQESYRYSDSIDDLRMLYADKERKISRKQQTYKAFQEKLDACHKALQLRWGKFHRNASLLKRQLTWQFNGHLGKKGISGHIKINYEEKTLSVEVKMPQDASNSTVQDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTVVDFAEAQGSQWIFITPHDISMVRQGDRIKKQQMAAPRT* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00365 1053 Coils Coil 380 428 - -
Pte6g00365 1053 Coils Coil 760 794 - -
Pte6g00365 1053 Coils Coil 625 645 - -
Pte6g00365 1053 Gene3D - 19 170 IPR027417 -
Pte6g00365 1053 Coils Coil 660 687 - -
Pte6g00365 1053 Coils Coil 803 823 - -
Pte6g00365 1053 Coils Coil 305 350 - -
Pte6g00365 1053 Pfam RecF/RecN/SMC N terminal domain 20 1045 IPR003395 -
Pte6g00365 1053 Gene3D - 795 1049 IPR027417 -
Pte6g00365 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 13 1052 - -
Pte6g00365 1053 Coils Coil 207 241 - -
Pte6g00365 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 1043 IPR027417 -
Pte6g00365 1053 Coils Coil 711 734 - -
Pte6g00365 1053 Gene3D - 184 349 - -
Pte6g00365 1053 Coils Coil 869 896 - -
Pte6g00365 1053 SUPERFAMILY Smc hinge domain 405 615 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00365 17 1054 Structural Maintenance of Chromosomes family AT5G61460 59.846 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00365 K22804 - qsa:O6P43_029878 1424.07