Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00348 ATGGGTGGTGGAGGAGGCGCTGTTTGTATCAATGAAGAGGAAGATGATGAAGAGAAGGAAGAGGAAAACAAGTGGCCTCCATGGCTGAAGCCACTGATTCAAACAAGGTTCTTTGTTCAATGCAAAGTCCATGTTGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGCATGAATGGAGCTCTTTGCTCTGCCTGTCTTTCTTCGCACAAAGATCACACTGCTATTCAGATAAGGAGGTCATCCTACCATGATGTGATAAGGGTGTCCGAGATACAGAAATTTCTGGATATAACAGGAGTCCAGACTTACATTATCAACAGTGCCAAGATTGTGTTCTTGAATGAAAGACCTCAACCTAGGCCTGGCAAAGGTGTCACCAATACCTGCCAGGTCTGTGAACGCAGCCTCCTTGATTCCTTCAGCTTCTGTTCTCTTGGCTGCAAGATTGTTGGGACTTCAAAGAAGTTCAGGAAGAAGAAAATGCTGGCTCAAACTGAAGGCTCAGAAGGTGAGGAATCAATGGACGGTAGTAGAAGTGGACGTGTGAGAAGCAAAATTCAAAGCTTCACACCATCAACACCACCCCCAACAGCAATGAGCTACAGAAATAACAAGAGGAGGAAGGGAATCCCGCACAGATCACCAATGGGTGGAGGGCTTGTTATAGAATACTAA 684 0.4503 MGGGGGAVCINEEEDDEEKEEENKWPPWLKPLIQTRFFVQCKVHVDSHKNECNMYCLDCMNGALCSACLSSHKDHTAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKMLAQTEGSEGEESMDGSRSGRVRSKIQSFTPSTPPPTAMSYRNNKRRKGIPHRSPMGGGLVIEY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00348 227 CDD Bbox2 41 80 - -
Pte6g00348 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 219 - -
Pte6g00348 227 MobiDBLite consensus disorder prediction 166 182 - -
Pte6g00348 227 MobiDBLite consensus disorder prediction 183 203 - -
Pte6g00348 227 Pfam PLATZ transcription factor 81 152 IPR006734 -
Pte6g00348 227 MobiDBLite consensus disorder prediction 166 227 - -
Pte6g00348 227 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00348 Pte-Chr6 3654308 3656753 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte6g00348 PLATZ 3.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00348 - - gmx:100792668 377.867