Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00315 ATGGAATCAAAGAAGTCTAACAAGATCACCGACATTGTTAGACTTCAGCGGATCCTCAAGAAGTGGAAAAGGCTTTCAGATAGTTCCAAGGACAGCTCTGCCTCGTGTTCTTCTCCAACCAATTCTGTCTCCAACAACACTTGCCGCACAAATGGCATTAGTAGAAGCAGCAGCTGCAGTAGTAAAAGCATGAGAACGTTGATCAAAAGAACACTATCATTTCCGGATTTGACTAGCATCAATGGTTCTTGTGCGAGTGATCTGGCCCCTGTGCCAAGAGGGTTTCTTGCTGTCTGTGTTGGGAAGGAGCTCAAAAGATACATCATTCCAACAGAATACCTGGGTCATGAGGCATTTCTGGTGTTACTGAGAGAAGCAGAAGAGGAATTCGGTTTCCAGCAAGAGGGGGTTCTCAAAATTCCATGCCAAGTACCAGTGTTTGAGAAAATTTTGAAGGCAGTTCAAGACAAAAAACAAGTTAGCACTACTTGCTTGTTAGAGATGGATGATAAGGATCAGATGCTAATCAATAATGTGGTTGCTTGTTCACCAGATCATGATCTTCCAACTCCTCACTCTCATCACCCTCCAGCTGCAGTCGCTCCTCAATTATGTCGGTGA 621 0.4412 MESKKSNKITDIVRLQRILKKWKRLSDSSKDSSASCSSPTNSVSNNTCRTNGISRSSSCSSKSMRTLIKRTLSFPDLTSINGSCASDLAPVPRGFLAVCVGKELKRYIIPTEYLGHEAFLVLLREAEEEFGFQQEGVLKIPCQVPVFEKILKAVQDKKQVSTTCLLEMDDKDQMLINNVVACSPDHDLPTPHSHHPPAAVAPQLCR* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00315 206 MobiDBLite consensus disorder prediction 28 59 - -
Pte6g00315 206 Pfam Auxin responsive protein 63 153 IPR003676 GO:0009733
Pte6g00315 206 MobiDBLite consensus disorder prediction 187 206 - -
Pte6g00315 206 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 63 150 IPR003676 GO:0009733
Pte6g00315 206 MobiDBLite consensus disorder prediction 29 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00315 Pte-Chr6 3331214 3332127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00315 1 196 Calmodulin-binding Proteins AT4G31320 45.408 3.65e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00315 K14488 - qsa:O6P43_017854 176.022