Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00314 ATGAAACGGTTTCCCTGTGCAGAAAAATCAGAGAGCAAAGCCGAGCAGCACGAAGCTGACGACAAATTGAGACTATATGCGAGAGAAACAAGTTCAGGGGGCGACTTGCCCCAAACTGGCGACTACCCCCTATATCCTGTAGCTAGGAGGGTCAATTCCTCCCACTCTATTTCCATGGACGATGATGTTGAAACTGGTGACTTGGGACCTTACCGGGAGAGGCCAAGAACTTTCCCTAACATGCGTTCCAAAGCTTATAACCCATTTATATTTCGTATTTTATCAGGAATTGACACCCGTGTCTTATTCATACTCATGATGTTGGCGCTAGTAGCAATCTTGTACTTTGGAGCAATGACGTCTCCAATCATTGTCTTTGTCTTCTCCATTTGTATCATCAGCTTCCTTTTGGCAATATATCTTGCTAAGTGGGTGCTTTCAAAGGATGAGGGGCCTCCTGAAATGGTTGAGATATCAGATGCAATACGAGATGGGGCAGAAGGGTTTTTCAGGACCCAATATGGGACTATATCTAAGATGGCTATGTTTCTTGCTCTTGTTATCCTCATCATATATTTGTTCAGAAGTACAACTCCTCAACAAGAATCTTCTGGTGTTGGAAGGACAACATCAGCATTTATAACTGTTGTGGCATTTCTCTTGGGAGCTCTTTGTTCGGGTGTTGCAGGATATGTTGGCATGTGGGTTTCAGTTCGTGCAAATGTTCGGGTCTCTAGTGCTGCAAGAAGGTCTGCCAGAGAGCCATTGCAGGTTGCTGTCCGTGCTGGTGGTTTCTCTGCATTGGTTGTTGTTGGAATGGCTGTAATTGGTATTGCTGTCCTTTATGCGACATTTTATGTGTGGTTGGGAGTTGATAAACCTGGGTCAATGAAGGTCACTGATCTTCCTCTACTCCTGGTTGGGTATGGTTTTGGTGCTTCTTTTGTCGCCTTATTTGCACAGCTTGGTGGTGGAATATACACAAAAGCTGCTGATGTTGGTGCAGATCTTGTTGGAAAAGTAGAGCAGGGTATACCTGAAGATGATGCTAGGAACCCAGCTGTAATTGCTGATCTGGTTGGAGACAACGTTGGTGATTGTGCGGCACGAGGTGCTGATCTTTTTGAAAGTATTGCAGCAGAAATAATTAGTGCTATGATACTTGGAGGAACGATGGCCCAACGTTGTAAAATTGAAGATCCCTCGGGTTTCATCTTGTTTCCTCTCGTTATCCACTCTTTTGATCTTATTGTCTCATCAGTTGGAATTTTTTCAATTAGAAGTACATGCAACTCTGGTGTGAAGGCTGCAATTGAAGACCCAATGGCGATTCTGCAAAAGGGATACTCTATTACAATTGTTTTAGCTGTTCTGTTGTTTGGACTGTCAACCCGATGGTTGCTTTATACTGAACAAGCACCTTCAGCATGGTTTAACTTTGCCTTATGTGGTCTGGTTGGTATCATCACGGCGTACATTTTTGTCTGGATCACCCAATATTACACAGACTACAAGCATGAGCCTGTACGCACATTAGCTCTTTCAAGCTCCACCGGCCATGGAACTAATATAATTGCTGGGGTCAGCTTGGGATTGGAATCAACAGCACTTCCTGTTCTTGTCATCAGTGTATCTATTATTTCTGCCTTCTGGCTTGGTCATACTTCTGGACTGGTGGATGAAGCAGGAAATGCAACTGGTGGCCTTTTTGGTACAGCTGTAGCCACGATGGGCATGCTTAGCACAGCAGCCTATATTCTCACCATGGATATGTTTGGTCCTATAGCAGATAACGCTGGAGGAATTGTAGAGATGAGTCGACAGCCTGAAAGTGTTAGGGAAATCACTGATGTCCTTGATGCAGTTGGGAACACTACCAAAGCTACTACCAAAGGATTTGCTATTGGTTCTGCTGCTCTGGCATCTTTCCTGCTCTTTAGTGCTTATATGGATGAGGTAGCTGCCTTTGCACATGAACCTTTTAAGCAGGTTGATATTGCTGTTCCTGAAGTTTTCATAGGTGGGTTACTGGGCTCCATGCTTATATTTGTATTTAGTGCATGGGCTTGTTCTGCAGTTGGTAGAACTGCCCAAGAGGTCGTTAATGAAGTCAGAAGACAGTTTATTGAGAGGCCTGGTATCATGGACTATAAAGAGAAACCAGATTATGGTCGCTGTGTTGCTATAGTAGCATCTGCATCATTAAGGGAGATGATAAAGCCTGGTGCTTTGGCAATAATTTCACCAATAGCAGTTGGTCTTATATTCAGAATCTTGGGTCACTATACAGGACATTCCCTCCTTGGTGCAAAGGTTGTAGCTGCCTTTCTGATGTTTGCAACAGTATCTGGTATTCTTATGGCACTTTTCCTGAATACTGCGGGTGGGGCTTGGGACAATGCGAAGAAATATATAGAGACAGGGGCTCTAGGAGGGAAAGGGAGTGAGGCTCATAAAGCAGCTGTTACTGGAGACACAGTGGGAGACCCATTCAAAGACACAGCTGGACCTTCCCTCCATGTGCTCATAAAGATGCTCGCTACAATAACCCTTGTCATGGCTCCAGTCTTTCTGTGA 2577 0.4439 MKRFPCAEKSESKAEQHEADDKLRLYARETSSGGDLPQTGDYPLYPVARRVNSSHSISMDDDVETGDLGPYRERPRTFPNMRSKAYNPFIFRILSGIDTRVLFILMMLALVAILYFGAMTSPIIVFVFSICIISFLLAIYLAKWVLSKDEGPPEMVEISDAIRDGAEGFFRTQYGTISKMAMFLALVILIIYLFRSTTPQQESSGVGRTTSAFITVVAFLLGALCSGVAGYVGMWVSVRANVRVSSAARRSAREPLQVAVRAGGFSALVVVGMAVIGIAVLYATFYVWLGVDKPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDARNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVIHSFDLIVSSVGIFSIRSTCNSGVKAAIEDPMAILQKGYSITIVLAVLLFGLSTRWLLYTEQAPSAWFNFALCGLVGIITAYIFVWITQYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGHTSGLVDEAGNATGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSRQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHEPFKQVDIAVPEVFIGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIAVGLIFRILGHYTGHSLLGAKVVAAFLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00314 858 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 148 857 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte6g00314 858 PIRSF H+-PPtase 117 858 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte6g00314 858 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 121 858 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte6g00314 858 Pfam Inorganic H+ pyrophosphatase 132 853 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte6g00314 858 MobiDBLite consensus disorder prediction 1 24 - -
Pte6g00314 858 NCBIfam V-type H(+)-translocating pyrophosphatase 126 857 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00314 Pte-Chr6 3321774 3330838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00314 59 859 Primary Pumps ATPases AT1G16780 85.268 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00314 K23025 - qsa:O6P43_017852 1394.41