Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00312 ATGGTACTGCTTCTGGGAGCTTGCCCAGAATACGGGATACTGATCTATGAATATATGGCTAATGGAAGCCTGGACGATCGTCTCTTCAGGAAAGGAAACACCCCACCTCTTTCATGGCAACTCCGGTTCCGAATTGCCGCAGAAATTGCCACTGGCCTACTCTTTCTCCATCAAACAAAGCCGGAGCCCTTGGTACACCGTGACCTTAAGCCTGGTAACATTTTACTGGATCACAACTTTGTTAGTAAGATTGGCGACGTTGGACTGGCCAGGCTCGTCCCTGCTGTTGCAGAGAATGTGACACAGTGCCGCATGACGTCGGCGGCTGGAACCTTTTGTTACATCGATCCAGAGTATCAACAAACAGGAATGCTGGGTGTCAAGTCGGATGTCTACTCACTAGGAATCTTGCTTCTACAAGTGGTAACAGGCAGGCCTCCTGTGGGATTGGCTCACCATGCGGCACAGGCTCTTGAGAATGGAACTTTGGCTGACATGCTAGACCAGTGTGTGCCTGATTGGCCAGTGCAGAAGGCCTTGACCCTTGCAAAGTTGGCTCTTCGATGCGCTGAGCTCAGACGCAAAGATAGGCCTGATCTCGGCAAGGAAGTCCTCCCGGAGCTCGTAAAACTAAAGGAGATTGCTGAAGCCAGCATCAACCACATACTGCTGGTTGGAGGTAATGCCGCAGGCTCTGTGCCTTCCCCTCACTGCGGTCAAACTTCGGTTCAACTGGTAAGTGGACAGCTGGGAATGAAATATATAACATATACATCAGAACAATATATATATAGGGGTATATATGCGTATACAGGTGTATATACATATACATATACACATCTACTCAATTGGGTAGCTTAG 861 0.4878 MVLLLGACPEYGILIYEYMANGSLDDRLFRKGNTPPLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNFVSKIGDVGLARLVPAVAENVTQCRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQVVTGRPPVGLAHHAAQALENGTLADMLDQCVPDWPVQKALTLAKLALRCAELRRKDRPDLGKEVLPELVKLKEIAEASINHILLVGGNAAGSVPSPHCGQTSVQLVSGQLGMKYITYTSEQYIYRGIYAYTGVYTYTYTHLLNWVA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00312 286 PANTHER OS02G0152300 PROTEIN 1 221 - -
Pte6g00312 286 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00312 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Pte6g00312 286 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00312 286 Pfam Protein kinase domain 12 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00312 286 Gene3D Transferase(Phosphotransferase) domain 1 1 216 - -
Pte6g00312 286 FunFam U-box domain-containing protein 51 19 218 - -
Pte6g00312 286 SUPERFAMILY Protein kinase-like (PK-like) 3 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00312 Pte-Chr6 3316889 3317749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00312 1 243 Receptor kinase-like Gene Family AT1G78940 74.074 2.51e-133 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte6g00312 Pkinase 4.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00312 - - qsa:O6P43_028031 389.808