Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00309 ATGAGCAAGAACAACCTCCAAGGTGAGATACCATATCAACTTCCCCCGAATGCTAATCACATGCATTTGGAAAACAATCAATTAAGTGGGAATATAAATGTACTTGCCAATCTTCCTCTTGATGATTTGACTGGAGGAAACTCTTGGTCATCTGGGGCAGCTCCTCCACCTCCCCCAGGAACTCCGGCTGTTAAAGTCAGGCCAAAAAAGAAAGCCGAAAACAACGATAGCAACAAATCTATAGTGACAGGACTTACTATAGCAGGAATTGCCATCGGGTTGCTCATAGTTATATTGATTATTGTAGCCGTTGTCTCAAGAAGAAGATCCTTTCCTTCTTCTTCTTCTTCTTCATATTTCCTTGATGAAGAGAAATCTAGTGGGAAAGGATCGCATACTTCCTTACCCAACGAGTTGCCTCTTGAAAAAGAATACAGTGGGTTTAAGCCGTTTGATGCTTTCGCTGCATTTCAAATAAAGCCTTTGCAAAAAACTCCTTCTACGGGTCTAAATTCTTCGGTTTCGGATGCGCAATCCTTCCTAGGTCATCATGAGTTAGTGAGTCGTCTCAACTCCAGAAAAAGTAACTTTGCTCCTGCTACTGCTTTTTCATGGACAGAGTTGCAGACCACCACTAGTAACTTCGGATCGGGTCGTCTGCTCGGAGAGGGATCCATTGGCTGTGTTTATCGAGCTAAATATGCCGACGGAAAGGTTTTGGCTGTGAAAAGGATTGAACCGAGCTTGCTGCATGGGCAAGACGAGTTTTCTGAAATCGTCTCAAACATCTCGAAGCTGTACCATCCAAATATTTCTGAACTTGTTGGTCATTGTTCAGAAAACGAGCAGTACATGTTAGTGTATGAGTTTTTCAGGAACGGCTCGCTTTATCATTTCCTACACATGTCAGATGATTTCAGCAAACCGCTAACATGGAACACTAGAATCAAAATTGCACTTGGCACAGCACGTGCTGTTGAGTACCTCCATGAGATTTGTTCTCCATCTGTAGTTCACAAGAATATCAAGTCATCTAACATTTTGCTGGACGCTGAACTCAATCCTCGTCTTTCTGACTGCGGCTTGGCATCTTTCCACCAGCGTACGAGCCAAAACCTTGGAGCAGGATACAATGCACCTGAGTGCATAAAGCCTTCGGCCTACACAATGAAGAGCGATGTCTACAGTTTCGGGATAGTCATGTTAGAATTGCTAACAGGAAGAAAGCCATTTGACAGCGGCAAACCTAAACCAGAGCAATCTCTAGTTAGGTGGGCAACCCCTCAGCTTCATGACATCGATGCGTTGGGGAAAATGGTTGATCCAGCCTTGCGTGGACTGTATCCTCCCAAGTCACTGTCTCGATTTGCAGATATTATCGCCCTCTGCGTTCAGCCTGAACCTGAATTCCGACCACCCATGTCTGAGGTGGTGCAAGCACTGGTCCGATTAATACAGCGTTCAAGTATGAGGATGAGTAGTGCTTCTCGTCGAACGGATGATTATGATTATTGA 1515 0.4449 MSKNNLQGEIPYQLPPNANHMHLENNQLSGNINVLANLPLDDLTGGNSWSSGAAPPPPPGTPAVKVRPKKKAENNDSNKSIVTGLTIAGIAIGLLIVILIIVAVVSRRRSFPSSSSSSYFLDEEKSSGKGSHTSLPNELPLEKEYSGFKPFDAFAAFQIKPLQKTPSTGLNSSVSDAQSFLGHHELVSRLNSRKSNFAPATAFSWTELQTTTSNFGSGRLLGEGSIGCVYRAKYADGKVLAVKRIEPSLLHGQDEFSEIVSNISKLYHPNISELVGHCSENEQYMLVYEFFRNGSLYHFLHMSDDFSKPLTWNTRIKIALGTARAVEYLHEICSPSVVHKNIKSSNILLDAELNPRLSDCGLASFHQRTSQNLGAGYNAPECIKPSAYTMKSDVYSFGIVMLELLTGRKPFDSGKPKPEQSLVRWATPQLHDIDALGKMVDPALRGLYPPKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLIQRSSMRMSSASRRTDDYDY* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00309 504 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 182 290 - -
Pte6g00309 504 SUPERFAMILY Protein kinase-like (PK-like) 194 481 IPR011009 -
Pte6g00309 504 Gene3D Transferase(Phosphotransferase) domain 1 291 502 - -
Pte6g00309 504 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 291 495 - -
Pte6g00309 504 Pfam Protein tyrosine and serine/threonine kinase 218 481 IPR001245 GO:0004672|GO:0006468
Pte6g00309 504 Gene3D Phosphorylase Kinase; domain 1 176 290 - -
Pte6g00309 504 PANTHER OS01G0253100 PROTEIN 150 489 - -
Pte6g00309 504 MobiDBLite consensus disorder prediction 112 134 - -
Pte6g00309 504 MobiDBLite consensus disorder prediction 112 138 - -
Pte6g00309 504 MobiDBLite consensus disorder prediction 46 76 - -
Pte6g00309 504 ProSiteProfiles Protein kinase domain profile. 215 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00309 Pte-Chr6 3292329 3295862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00309 1 505 Strubbelig Receptor Gene Family AT1G78980 54.144 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte6g00309 PK_Tyr_Ser-Thr 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00309 - - qsa:O6P43_028034 595.504