Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00300 ATGTCGTTGGTTGAGGAGAACAAGAGTTCGATTGGAGCTTATGGGGCAATACCACTTGTTGCGTTGTTATTAACTACGTCTAGTAGAGGAAAGAATGACGCTTTGACAATGTATAAGCTTTGTTCTCTAAAGAGTGATAAAGAGAGGGCAATGAGTGTTGGAGTTGTGCAACCAGTCGTGAGTTTGGTGACAGAACAAGGTATAGGTTTAGCTGAGAATGACATGGTGGTTTTGAACAGTTTGGCTGATATTGTACAATGGAAAGAAGCAATTGTCGAGGAAGGTGGGATCGAGCCACTTGTGAAAGCAATTGAAGATGCAACTGTGAAAGGAAGGAAGGAGTTTGCTCTGCTGATGTTGCTGTAG 366 0.4262 MSLVEENKSSIGAYGAIPLVALLLTTSSRGKNDALTMYKLCSLKSDKERAMSVGVVQPVVSLVTEQGIGLAENDMVVLNSLADIVQWKEAIVEEGGIEPLVKAIEDATVKGRKEFALLMLL* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00300 121 PANTHER U BOX DOMAIN-CONTAINING 2 121 - -
Pte6g00300 121 Gene3D - 1 120 IPR011989 -
Pte6g00300 121 SUPERFAMILY ARM repeat 5 114 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00300 Pte-Chr6 3216123 3217418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00300 1 120 U-box Gene Family AT1G71020 36.585 8.22e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00300 - - qlo:115991839 144.821