Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00292 ATGGGTCTCGATTCATTGATCAAGGCAGCTGCTATTCTGTCGTTGCTCATTTGCCTCTCAACTTTTGTTTCGGCAAAGAAGGCTAACGACGTTTCCGATTTGCAGATTGGTGTCAAGTTTAAGCCAACGTCATGTACTGTTAAGGCGCACAAAGGTGATAAAGTCAAAGTACACTATCGGGGAAAGCTCACTGATGGCACTGTTTTTGACTCTAGTTTTGAAAGGGATAGTCCCATTGAATTTGAGCTTGGTGCTGGGCATGTTATCCAAGGGTGGGATCAAGGATTGACAGGAATGTGTTTGGGTGAGAAGCGCAAGTTGAAAATACCTTCAAAACTTGGTTATGGGGAAAGTGGTTCCCCACCCACAATTCCAGGGGGAGCCACCTTGATATTCGAGACTGAGCTTGTTGGAGTGAACGAAAAATCTGCGGGTGAAGAACCAAAAAGTGAGCTCTAG 459 0.4532 MGLDSLIKAAAILSLLICLSTFVSAKKANDVSDLQIGVKFKPTSCTVKAHKGDKVKVHYRGKLTDGTVFDSSFERDSPIEFELGAGHVIQGWDQGLTGMCLGEKRKLKIPSKLGYGESGSPPTIPGGATLIFETELVGVNEKSAGEEPKSEL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00292 152 Gene3D - 20 140 IPR046357 GO:0003755
Pte6g00292 152 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 137 IPR001179 GO:0003755
Pte6g00292 152 FunFam Peptidylprolyl isomerase 20 140 - -
Pte6g00292 152 PANTHER PEPTIDYLPROLYL ISOMERASE 10 142 IPR044609 GO:0000413|GO:0003755|GO:0061077
Pte6g00292 152 SUPERFAMILY FKBP-like 31 142 - -
Pte6g00292 152 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00292 Pte-Chr6 3127179 3132654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00292 2 144 Calmodulin-binding Proteins AT5G48570 30.921 9.80e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00292 K09569 - cit:102614652 227.254